Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.hor   NRB4   mediator of RNA polymerase II transcription subunit 15a-like protein 
 ath-u.4   NRB4   mediator of RNA polymerase II transcription subunit 15a-like protein 
 ath-r.6   NRB4   mediator of RNA polymerase II transcription subunit 15a-like protein 
 ath-m.9   NRB4   mediator of RNA polymerase II transcription subunit 15a-like protein 
 ath-m.4.notissue   NRB4   mediator of RNA polymerase II transcription subunit 15a-like protein 
 ath-m.4.tis   NRB4   mediator of RNA polymerase II transcription subunit 15a-like protein 
 ath-m.4.str   NRB4   mediator of RNA polymerase II transcription subunit 15a-like protein 
 ath-m.4.bio   NRB4   mediator of RNA polymerase II transcription subunit 15a-like protein 
 ath-m.4.lig   NRB4   mediator of RNA polymerase II transcription subunit 15a-like protein 
 ath-e.1   NRB4   mediator of RNA polymerase II transcription subunit 15a-like protein 
 gma-u.4   100782132   mediator of RNA polymerase II transcription subunit 15a-like 
 gma-u.4   100783762   mediator of RNA polymerase II transcription subunit 15a 
 gma-u.4   100792913   mediator of RNA polymerase II transcription subunit 15a 
 ppo-u.4   18096675   mediator of RNA polymerase II transcription subunit 15a 
 ppo-u.4   7470541   mediator of RNA polymerase II transcription subunit 15a 
 ppo-u.4   112323243   mediator of RNA polymerase II transcription subunit 15a-like 
 mtr-u.4   11430217   mediator of RNA polymerase II transcription subunit 15a 
 mtr-u.4   11442044   mediator of RNA polymerase II transcription subunit 15a 
 sly-u.4   101257852   mediator of RNA polymerase II transcription subunit 15a 
 osa-u.4   4346348   mediator of RNA polymerase II transcription subunit 15a 

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Top 50 coexpressed genes to NRB4 (ath-m.4.hor coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 ath4144   Endocytosis  2 146 2.22
 ath511   Other glycan degradation  1 19 -
 ath20   Citrate cycle (TCA cycle)  1 64 -
 ath3018   RNA degradation  2 113 -
 ath3015   mRNA surveillance pathway  3 119 -

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ath:NRB4 (mediator of RNA polymerase II transcription subunit 15a-like protein) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition specific* Reference

ath-m.4.hor
for
NRB4
ath-u.4
for
NRB4
ath-r.6
for
NRB4
ath-m.9
for
NRB4
ath-m.4.notissue
for
NRB4
ath-m.4.tis
for
NRB4
ath-m.4.str
for
NRB4
ath-m.4.bio
for
NRB4
ath-m.4.lig
for
NRB4
ath-e.1
for
NRB4
gma-u.4
for
100782132
gma-u.4
for
100783762
gma-u.4
for
100792913
ppo-u.4
for
18096675
ppo-u.4
for
7470541
ppo-u.4
for
112323243
mtr-u.4
for
11430217
mtr-u.4
for
11442044
sly-u.4
for
101257852
osa-u.4
for
4346348
1 ELF7 hydroxyproline-rich glycoprotein family protein 844312 At1g79730 5.3 5.8
 4.7
 5.3
 19.0
 0.4
 2.4
 2.5
 3.3
 3.2
 4.0
3.0
 5.7
5.2
 4.6
4.0
 4.2
2.2
 3.8
3.2
 4.2
2.4
 1.3
 5.1
 5.2
 1.2
2 FAAH fatty acid amide hydrolase 836565 At5g64440 4.9 3.7
 3.8
 2.5
 757.3
 0.9
 1.2
 3.3
 -0.2
 1.2
 2.4
1.7
 2.4
1.8
 2.6
1.6
 0.8
 0.4
 0.7
 -1.2
 -0.7
 0.8
0.7
 1.2
3 TKL TIC-like protein 825493 At3g63180 4.7 3.1
 3.1
 2.3
 1842.7
 -0.1
 1.0
 0.5
 -1.6
 4.4
 4.5
4.2
 2.9
2.4
 2.5
1.7
 3.8
3.7
 4.7
4.7
 3.4
3.3
 2.7
 6.3

4 KAK HECT ubiquitin protein ligase family protein KAK 830017 At4g38600 4.7 8.5
 7.3
 7.4
 3.6
 1.9
 4.2
 3.5
 3.1
 7.6
 5.0
3.8
 7.1
6.6
 5.6
5.3
 4.3
3.5
 4.7
3.8
 4.4
3.4
 6.4
 8.3
 7.1
6.9
 3.1
5 MET18 ARM repeat superfamily protein 834864 At5g48120 4.6 1.9
 1.6
 1.7
 816.8
 -0.4
 1.0
 1.2
 2.9
 3.7
 0.4
-0.2
 1.0
-0.5
 0.8
-0.4
 0.5
 1.0
 -0.1
 2.8
2.2
 0.7
0.6
 -0.8
 0.8
6 AT3G24180 Beta-glucosidase, GBA2 type family protein 822004 At3g24180 4.6 3.8
 3.4
 3.1
 386.1
 2.5
 1.9
 1.5
 0.5
 3.3
 2.5
0.3
 2.0
1.6
 1.0
0.6
 4.9
 4.0
 4.7
 0.8
 5.7
 0.3
 2.6
-0.2
7 AT1G80930 MIF4G domain-containing protein / MA3 domain-containing protein 844433 At1g80930 4.5 2.4
 2.1
 2.1
 1851.2
 -0.5
 0.1
 1.1
 1.2
 2.1
 3.5
1.2
 4.0
2.9
 3.8
3.2
 6.7
 4.3
 6.4
 3.7
 2.6
 2.5
1.1
 1.4
8 SAC3A SAC3/GANP/Nin1/mts3/eIF-3 p25 family 818519 At2g39340 4.5 4.7
 4.4
 3.8
 366.9
 1.6
 1.2
 1.3
 0.5
 3.6
 4.0
3.5
 4.5
3.8
 2.4
1.9
 5.5
5.1
 4.5
3.5
 5.4
4.8
 4.1
 7.5
 5.2
 2.1
1.7
9 AT5G05570 transducin family protein / WD-40 repeat family protein 830440 At5g05570 4.4 5.8
 5.0
 5.0
 217.6
 2.3
 1.2
 2.9
 -0.1
 3.4
 4.2
2.0
 4.0
3.1
 4.1
3.8
 2.1
2.0
 2.5
2.2
 1.9
1.8
 2.0
1.9
 3.5
3.2
 2.4
1.7
 2.8
10 AT5G06120 ARM repeat superfamily protein 830499 At5g06120 4.3 4.5
 3.0
 4.8
 222.1
 2.8
 3.0
 1.3
 2.5
 4.6
 1.5
1.4
 3.7
3.1
 2.5
1.7
 0.7
0.5
 0.3
0.1
 0.4
0.3
 2.0
1.9
 3.9
0.9
 2.6
 2.2
1.0
11 CID12 CTC-interacting domain 12 826653 At4g10610 4.2 0.9
 0.5
 1.2
 1598.5
 -0.0
 1.7
 1.7
 -0.3
 -1.1
 1.4
1.4
 2.5
2.3
 2.2
2.1
 1.4
1.1
 0.7
0.1
 1.5
1.4
 2.3
1.4
 1.2
0.0
 3.4
2.9
 3.1
12 AT3G53390 Transducin/WD40 repeat-like superfamily protein 824507 At3g53390 4.2 4.9
 4.7
 3.8
 60.6
 4.4
 4.7
 2.7
 1.4
 5.1
 2.7
1.4
 1.7
1.2
 2.6
1.9
 3.0
1.7
 2.5
0.7
 2.7
1.5
 1.2
 2.4
 2.5
2.5
 4.2
13 ACO1 aconitase 1 829737 At4g35830 4.1 3.8
 3.8
 2.8
 258.2
 0.7
 1.5
 1.8
 -1.0
 1.4
 2.6
2.5
 2.4
2.3
 4.1
3.1
 1.2
1.2
 1.7
0.9
 1.6
1.5
 2.2
2.2
 3.6
1.9
 3.9
3.1
 2.6
1.4
14 AT1G02080 transcription regulator 839244 At1g02080 4.1 8.2
 7.3
 6.9
 2.8
 1.4
 4.9
 3.1
 1.6
 7.3
 4.1
2.6
 6.7
4.9
 4.4
3.1
 4.3
3.3
 3.7
2.4
 4.2
3.4
 6.2
 5.8
 5.1
 4.9
0.6
15 SDG25 SET domain protein 25 834246 At5g42400 4.1 3.2
 2.9
 2.8
 980.3
 0.6
 0.6
 1.7
 0.7
 3.8
 2.8
2.5
 4.2
3.8
 3.2
2.9
 1.3
0.8
 3.3
1.9
 1.1
0.3
 1.1
 3.8
 2.0
 1.5
16 RRS1 Disease resistance protein (TIR-NBS-LRR class) 834562 At5g45260 4.1 3.9
 3.3
 3.4
 59.4
 1.5
 3.4
 2.2
 1.4
 0.7









17 ESP4 HEAT repeat-containing protein 831597 At5g01400 4.1 4.6
 5.8
 2.2
 92.4
 0.5
 2.6
 1.8
 0.3
 6.8
 4.1
3.6
 6.7
5.5
 3.9
3.8
 3.7
 3.6
 3.5
 3.6
 3.8
 2.6
 3.8
18 TBL16 TRICHOME BIREFRINGENCE-LIKE 16 832191 At5g20680 4.0 3.2
 3.3
 2.3
 438.6
 1.4
 1.5
 2.2
 1.1
 4.4
 1.4
0.6
 1.6
1.2
 2.4
2.1
 1.0
-1.0
 0.3
0.2
 1.0
-0.8
 1.1
1.0
 1.8
1.5
 0.1
0.0
 1.7
0.6
19 AT3G57890 Tubulin binding cofactor C domain-containing protein 824958 At3g57890 4.0 4.7
 4.9
 3.3
 66.9
 0.2
 4.7
 1.0
 1.2
 3.5
 1.9
1.5
 3.5
3.1
 3.4
2.2
 2.2
0.3
 2.6
0.4
 2.6
0.9
 3.5
2.9
 2.8
2.2
 4.5
 1.5
20 PLDP1 phospholipase D P1 820932 At3g16785 4.0 4.1
 2.7
 4.3
 54.1
 3.6
 2.1
 2.4
 1.6
 3.0
 2.5
2.4
 4.5
4.0
 3.6
3.5
 2.5
1.6
 2.4
1.5
 2.2
1.3
 2.6
1.0
 3.3
1.8
 3.6
0.3
 1.3
0.3
21 AT1G53050 Protein kinase superfamily protein 841739 At1g53050 4.0 1.6
 2.0
 0.7
 5358.2
 -0.3
 -0.2
 -0.1
 -1.7
 4.5
 1.3
1.1
 2.2
1.1
 0.5
0.3
 2.4
0.3
 1.7
0.4
 2.5
0.1
 3.8
 1.7
 2.0
0.3
 0.4
22 LD Homeodomain-like superfamily protein 827904 At4g02560 3.9 3.7
 3.8
 2.6
 1085.5
 1.1
 0.5
 1.6
 0.5
 5.6
 1.6
1.0
 4.3
3.6
 3.3
2.5
 4.4
4.0
 3.7
3.4
 4.7
4.5
 1.6
 5.2
 1.8
1.4
 4.0
23 AT5G61140 U5 small nuclear ribonucleoprotein helicase 836235 At5g61140 3.9 5.7
 4.7
 5.2
 1601.2
 1.3
 0.5
 1.0
 -1.0
 5.3
 6.5
 5.3
 4.3
 3.0
 2.9
 2.9
 2.2
 4.0
 3.2
 5.2
24 YKT61 SNARE-like superfamily protein 835918 At5g58060 3.9 3.9
 3.7
 3.1
 729.5
 2.0
 0.5
 2.9
 -0.3
 1.5
 0.4
0.4
 1.3
1.2
 0.6
0.5
 0.3
-0.9
 -0.4
-0.9
 0.4
-0.6
 0.6
 1.9
 1.4
 0.6
-0.1
25 SMG7 Telomerase activating protein Est1 832060 At5g19400 3.9 5.8
 5.1
 4.9
 8.4
 1.9
 3.6
 3.1
 2.7
 5.0
 1.8
1.6
 3.5
2.8
 2.6
2.6
 3.2
0.8
 3.8
2.7
 2.8
0.6
 4.2
2.2
 5.7
5.1
 5.4
3.4
 3.0
26 TPL Transducin family protein / WD-40 repeat family protein 838144 At1g15750 3.9 3.2
 3.0
 2.5
 3414.5
 0.8
 -0.0
 1.3
 0.8
 2.9
 3.0
3.0
 3.9
3.8
 3.1
2.4
 4.1
2.7
 5.3
3.4
 3.8
2.7
 2.8
2.5
 6.4
4.4
 3.3
1.6
 5.8
27 AT1G04140 Transducin family protein / WD-40 repeat family protein 839272 At1g04140 3.9 5.2
 4.6
 4.4
 35.7
 1.1
 3.8
 1.3
 2.2
 4.9
 5.9
5.2
 7.6
7.0
 7.7
5.9
 4.4
4.4
 4.3
2.6
 5.0
4.8
 3.0
2.4
 8.2
4.5
 4.1
2.5
 2.0
1.7
28 GTE8 global transcription factor group E8 822345 At3g27260 3.9 2.8
 2.8
 2.0
 407.0
 3.0
 1.6
 2.2
 -0.0
 1.3
 2.1
1.5
 4.2
2.4
 2.9
1.9
 3.0
2.2
 5.4
2.6
 2.5
2.4
 2.9
2.4
 5.7
2.9
 1.6
0.5
 3.3
0.9
29 PA200 proteasome activating protein 200 820533 At3g13330 3.9 5.8
 5.2
 4.8
 20.4
 1.7
 2.8
 2.3
 2.9
 4.3
 4.5
3.6
 6.2
4.5
 6.5
4.0
 2.3
0.8
 2.0
1.8
 2.0
0.7
 2.2
 4.5
 5.9
 4.0
30 QC glutaminyl cyclase 828677 At4g25720 3.9 0.8
 1.4
 0.1
 1188.9
 -0.0
 0.3
 2.3
 -0.4
 4.2
 1.6
0.3
 -0.1
-0.2
 1.0
0.4
 -0.1
-0.5
 0.0
-0.1
 -0.3
-0.3
 0.5
-0.9
 -0.0
-1.6
 1.1
-0.1
 -1.1
31 AT5G16210 HEAT repeat-containing protein 831480 At5g16210 3.9 4.3
 3.3
 4.1
 1006.2
 2.7
 1.2
 0.6
 1.1
 2.6
 2.2
 1.1
 0.9
 1.4
 0.7
 1.4
 3.4
 3.8
 0.5
 0.4
32 TAP46 2A phosphatase associated protein of 46 kD 835379 At5g53000 3.8 2.0
 2.1
 1.3
 20.5
 0.2
 2.3
 2.4
 0.6
 -0.0
 0.7
0.7
 1.5
0.1
 1.5
0.5
 0.5
0.5
 -0.2
-0.3
 0.4
0.1
 0.2
 2.0
 0.4
 1.1
1.0
33 PRT6 proteolysis 6 830916 At5g02310 3.8 6.7
 6.5
 5.0
 44.1
 1.9
 2.7
 1.6
 2.4
 5.2
 6.4
5.1
 6.4
4.5
 4.8
2.8
 2.9
 3.0
 2.9
 6.0
 9.7
 4.4
3.5
 5.1
34 AT1G63490 transcription factor jumonji (jmjC) domain-containing protein 842655 At1g63490 3.8 4.7
 4.0
 4.1
 96.6
 1.1
 2.0
 1.7
 0.7
 2.7
 1.1
1.0
 2.2
1.5
 1.7
1.0
 1.7
 3.4
 1.5
 2.0
 6.5
 3.7
 3.5
35 AT1G27595 symplekin 839651 At1g27595 3.8 3.2
 3.0
 2.6
 4369.5
 -0.1
 0.1
 0.5
 -0.5
 5.8
 2.6
2.3
 3.3
3.0
 2.0
1.6
 3.8
 4.5
 3.5
 3.7
 4.5
 5.4
 3.9
36 AT3G59290 ENTH/VHS family protein 825098 At3g59290 3.8 6.0
 5.7
 4.7
 164.8
 1.3
 2.6
 1.3
 -0.2
 6.5
 4.1
4.0
 5.4
4.6
 4.8
3.7
 3.9
3.4
 2.2
1.7
 4.4
3.7
 2.2
1.4
 4.7
1.7
 2.1
0.7
 3.0
37 AT2G27900 coiled-coil protein 817335 At2g27900 3.8 2.2
 2.4
 1.4
 322.2
 0.5
 1.5
 1.6
 0.9
 3.4
 3.3
3.1
 2.8
2.4
 2.3
1.8
 2.1
1.6
 2.0
0.2
 1.6
1.3
 2.4
 2.9
 4.7
 2.2
38 AT3G13340 Transducin/WD40 repeat-like superfamily protein 820534 At3g13340 3.7 0.5
 0.2
 0.8
 711.8
 1.1
 2.2
 1.3
 0.1
 -2.7
 1.8
1.5
 2.1
1.6
 1.2
1.1
 2.0
1.6
 2.2
1.9
 1.9
1.8
 0.9
-1.1
 2.0
1.2
 1.9
-1.0
 2.0
0.1
39 FHY3 far-red elongated hypocotyls 3 821781 At3g22170 3.7 4.1
 2.8
 4.3
 111.7
 0.5
 1.1
 3.4
 1.0
 2.7
 4.6
2.9
 3.7
3.1
 2.8
2.6
 3.9
2.9
 4.2
3.2
 3.2
2.7
 3.8
 2.3
 1.3
40 SCC3 sister-chromatid cohesion protein 3 819410 At2g47980 3.7 3.5
 3.0
 3.0
 559.0
 0.3
 0.9
 1.6
 0.7
 3.9
 2.5
 4.3
 2.8
 3.4
0.8
 3.5
1.6
 3.1
0.9
 2.5
 2.2
 3.9
 2.0
41 DCP1 decapping 1 837357 At1g08370 3.7 4.5
 4.3
 3.4
 231.4
 1.2
 1.0
 2.7
 0.5
 4.2
 3.0
2.2
 4.6
3.8
 4.3
2.9
 3.0
2.2
 2.3
1.7
 3.1
2.6
 1.3
 3.4
 3.5
0.7
 1.7
0.2
42 AT3G58570 P-loop containing nucleoside triphosphate hydrolases superfamily protein 825026 At3g58570 3.7 3.2
 2.5
 2.9
 418.2
 0.8
 2.0
 1.3
 2.1
 0.9
 2.1
1.7
 4.2
2.9
 4.0
3.2
 3.0
2.5
 3.3
1.3
 3.2
2.9
 1.7
1.2
 3.2
0.5
 3.1
1.0
 1.6
1.2
43 RFR1 REF4-related 1 821938 At3g23590 3.7 2.0
 0.7
 2.8
 12248.8
 -0.5
 -0.6
 -0.9
 1.3
 1.5
 4.7
2.8
 5.4
3.5
 5.6
2.9
 3.3
2.9
 3.2
2.7
 3.5
2.8
 2.3
1.7
 5.2
2.0
 3.2
1.2
 2.6
44 RIN2 RPM1 interacting protein 2 828626 At4g25230 3.7 2.9
 2.9
 2.0
 146.2
 2.0
 2.6
 1.8
 2.7
 1.0
 2.2
0.3
 1.9
1.7
 1.7
1.2
 2.1
1.4
 3.1
1.0
 2.0
1.3
 1.5
 3.9
 3.0
 3.0
45 AT5G47480 RGPR-like protein 834798 At5g47480 3.7 7.5
 7.5
 5.5
 4.2
 2.0
 5.0
 3.0
 1.9
 6.8
 4.9
4.8
 6.6
6.0
 5.8
5.2
 3.5
3.4
 3.1
1.7
 3.6
3.2
 5.4
4.8
 6.6
5.3
 6.0
4.5
 5.1
4.1
46 AT1G23230 mediator of RNA polymerase II transcription subunit 838932 At1g23230 3.7 8.1
 8.5
 5.4
 51.9
 2.0
 2.1
 2.4
 1.0
 7.5
 5.9
 6.5
 6.2
 3.4
 3.4
 3.4
 5.7
 5.2
 7.3
 6.0
47 SCD1 stomatal cytokinesis defective / SCD1 protein (SCD1) 841327 At1g49040 3.7 5.9
 4.8
 5.3
 1081.9
 -0.1
 1.1
 2.1
 -0.8
 3.5
 2.8
 4.8
 4.1
 2.6
1.2
 2.6
1.2
 2.3
1.0
 2.5
 3.3
 2.3
 2.7
48 AT4G01290 chorismate synthase 828103 At4g01290 3.7 7.1
 10.6
 1.8
 687.2
 3.4
 2.5
 2.1
 1.0
 4.9
 6.6
5.2
 4.9
4.3
 3.8
3.1
 4.0
3.0
 4.3
3.0
 4.0
2.8
 4.4
 5.1
 4.3
3.1
 7.0
49 AT5G07910 Leucine-rich repeat (LRR) family protein 830685 At5g07910 3.6 1.3
 1.4
 0.9
 579.5
 1.4
 0.7
 2.6
 1.4
 -0.2
 1.2
0.3
 1.4
1.1
 1.4
1.3
 0.6
 0.2
 0.6
 -1.8
 -0.2
 1.1
-0.2
 -0.3
50 RBL15 RHOMBOID-like protein 15 825015 At3g58460 3.6 1.9
 1.9
 1.3
 2423.8
 0.3
 0.4
 1.1
 -0.5
 3.5
 1.7
1.4
 0.6
-0.2
 0.9
0.3
 1.4
 -0.3
 1.6
 1.6
 2.3
 -0.1
 -1.1
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