Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.4   TRP1   tryptophan biosynthesis 1 
 ath-r.6   TRP1   tryptophan biosynthesis 1 
 ath-m.9   TRP1   tryptophan biosynthesis 1 
 ath-m.4.notissue   TRP1   tryptophan biosynthesis 1 
 ath-m.4.tis   TRP1   tryptophan biosynthesis 1 
 ath-m.4.str   TRP1   tryptophan biosynthesis 1 
 ath-m.4.hor   TRP1   tryptophan biosynthesis 1 
 ath-m.4.bio   TRP1   tryptophan biosynthesis 1 
 ath-m.4.lig   TRP1   tryptophan biosynthesis 1 
 ath-e.1   TRP1   tryptophan biosynthesis 1 
 gma-u.4   100794615   anthranilate phosphoribosyltransferase, chloroplastic 
 ppo-u.4   7456898   anthranilate phosphoribosyltransferase, chloroplastic 
 mtr-u.4   11430186   anthranilate phosphoribosyltransferase, chloroplastic 
 sly-u.4   101249247   anthranilate phosphoribosyltransferase, chloroplastic-like 
 sly-u.4   101257271   anthranilate phosphoribosyltransferase, chloroplastic 
 osa-u.4   4331468   anthranilate phosphoribosyltransferase, chloroplastic 

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Top 50 coexpressed genes to TRP1 (ath-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 ath1230   Biosynthesis of amino acids  19 230 23.74
 ath400   Phenylalanine, tyrosine and tryptophan biosynthesis  15 52 27.35
 ath966   Glucosinolate biosynthesis  7 23 13.00
 ath920   Sulfur metabolism  7 40 11.13
 ath270   Cysteine and methionine metabolism  6 113 6.41

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ath:TRP1 (tryptophan biosynthesis 1) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition specific* Reference

ath-u.4
for
TRP1
ath-r.6
for
TRP1
ath-m.9
for
TRP1
ath-m.4.notissue
for
TRP1
ath-m.4.tis
for
TRP1
ath-m.4.str
for
TRP1
ath-m.4.hor
for
TRP1
ath-m.4.bio
for
TRP1
ath-m.4.lig
for
TRP1
ath-e.1
for
TRP1
gma-u.4
for
100794615
ppo-u.4
for
7456898
mtr-u.4
for
11430186
sly-u.4
for
101249247
sly-u.4
for
101257271
osa-u.4
for
4331468
1 AT2G04400 Aldolase-type TIM barrel family protein 814980 At2g04400 14.2 12.7
 11.8
 1.4
 3.8
 5.5
 4.9
 5.5
 2.1
 8.2
 4.9
1.8
 3.6
 1.2
 0.8
 1.3
 1.4
2 TSA1 tryptophan synthase alpha chain 824629 At3g54640 12.9 12.0
 10.3
 2.5
 3.8
 5.0
 5.2
 5.2
 4.4
 13.7
 1.4
1.3
 2.2
1.7
 -1.3
 0.7
 -0.4
 7.2
3.1
3 YLS5 Class I glutamine amidotransferase-like superfamily protein 818470 At2g38860 11.4 10.2
 9.5
 3.0
 1.1
 5.2
 4.6
 4.5
 5.1
 9.4




0.9
4 ASA1 anthranilate synthase alpha subunit 1 830457 At5g05730 10.6 9.6
 8.6
 3.5
 5.2
 5.1
 3.3
 5.1
 5.2
 8.0
 1.5
0.9
 2.1
1.3
 -0.4
-1.5
 0.1
 -0.2
 5.3
0.1
5 CYP79B2 cytochrome P450, family 79, subfamily B, polypeptide 2 830154 At4g39950 9.0 7.6
 7.9
 6.9
 2.2
 4.6
 3.2
 4.7
 4.6
 7.8
 -0.0
-0.7



-0.2
-0.5
6 ASB1 anthranilate synthase beta subunit 1 839103 At1g25220 8.8 9.3






3.1
 0.7
-0.1
 0.9
 0.2
 0.1
 -0.2
 4.4
1.0
7 CYP83B1 cytochrome P450, family 83, subfamily B, polypeptide 1 829277 At4g31500 8.8 6.6
 8.6
 26.5
 3.3
 3.4
 3.4
 2.9
 1.2
 10.2
 1.6
1.4
 0.1
-0.6
 1.0
1.0
 1.4
0.7
 1.7
1.4
 -0.4
8 SAL1 SAL1 phosphatase-like protein 836519 At5g63980 8.7 7.6
 7.4
 61.3
 4.1
 2.4
 3.3
 3.0
 0.7
 9.6
 1.8
1.3
 2.6
0.9
 -0.2
 1.2
 0.8
 1.2
0.7
9 TAAC thylakoid ATP/ADP carrier 831861 At5g01500 8.4 7.2
 7.4
 5.7
 -0.7
 4.3
 5.0
 4.2
 2.3
 7.8
 3.3
0.1
 2.1
-0.2
 -1.0
-1.6
 0.8
 1.0
 1.7
10 AT3G23570 alpha/beta-Hydrolases superfamily protein 821936 At3g23570 8.1 7.1
 6.9
 20.1
 1.3
 4.2
 3.3
 3.4
 4.8
 3.3
 1.6
-0.3
 -0.9
-0.9
 0.5
0.3
 1.8
0.1
 1.1
0.8
 0.5
-0.2
11 PRS3 phosphoribosyl pyrophosphate (PRPP) synthase 3 837613 At1g10700 8.1 7.7
 6.3
 8.8
 1.1
 3.7
 3.0
 3.5
 2.4
 7.1
 1.2
0.9
 0.9
0.8
 0.5
0.0
 0.5
0.4
 1.2
-0.2
 5.4
-0.7
12 TSB1 tryptophan synthase beta-subunit 1 835571 At5g54810 8.1 8.4






8.8
 1.7
1.6
 2.7
1.6
 -0.0
-0.2
 1.8
1.3
 2.8
0.7
 6.9
13 UGT74B1 UDP-glucosyl transferase 74B1 839022 At1g24100 7.9 6.3
 7.4
 22.2
 3.1
 3.2
 3.1
 3.6
 2.1
 5.2
 1.0
0.6
 1.8
1.1
 0.8
0.6
 1.9
1.7
 2.2
1.8
 1.9
1.4
14 AKN2 APS-kinase 2 830153 At4g39940 7.9 6.6
 6.9
 31.9
 3.3
 3.2
 3.5
 2.7
 3.7
 5.3





15 SOT16 sulfotransferase 16 843750 At1g74100 7.6 6.3
 6.9
 14.0
 2.6
 3.6
 3.3
 2.9
 1.6
 8.8
 1.1
0.4
 1.3
1.0
 3.7
2.2
 1.6
0.1
 0.5
-0.4
 0.3
0.1
16 AT5G44720 Molybdenum cofactor sulfurase family protein 834501 At5g44720 7.6 6.9
 6.3
 75.3
 0.9
 2.0
 3.5
 2.7
 2.2
 5.7
 0.8
0.3
 0.8
 2.0
1.1
 -0.2
 -0.7
 0.7
-0.2
17 AIG2 AIG2-like (avirulence induced gene) family protein 822529 At3g28930 7.5 6.7
 6.3
 6.0
 2.5
 4.4
 5.1
 4.9
 2.4
 3.6





18 LAP1 Cytosol aminopeptidase family protein 816954 At2g24200 7.5 6.4
 6.6
 6.0
 1.4
 3.6
 4.3
 4.2
 0.7
 7.6
 4.7
0.9
 2.2
-0.6
 2.3
-0.9
 0.9
0.7
 3.5
2.7
 0.4
0.1
19 OASC O-acetylserine (thiol) lyase isoform C 825145 At3g59760 7.3 6.1
 6.5
 109.3
 2.0
 1.7
 3.4
 3.4
 1.0
 5.2
 3.7
3.6
 1.8
1.7
 2.0
1.6
 0.8
0.7
 5.2
2.5
 1.5
1.0
20 SUR1 Tyrosine transaminase family protein 816585 At2g20610 7.3 5.7
 6.8
 60.1
 3.2
 1.9
 3.3
 3.1
 1.3
 5.3





21 AT3G08640 alphavirus core family protein (DUF3411) 820011 At3g08640 7.3 6.6
 6.0
 25.7
 0.2
 2.9
 3.9
 4.3
 0.9
 3.3
 1.1
1.0
 1.2
0.1
 -0.3
-0.9
 -0.0
-0.2
 0.2
-0.5
 1.6
22 APS1 ATP sulfurylase 1 821861 At3g22890 7.0 5.9
 6.1
 83.4
 1.6
 2.0
 3.3
 2.5
 1.2
 3.9
 3.9
0.0
 4.1
1.3
 -0.3
-1.1
 2.1
0.6
 1.9
-0.2
 1.9
1.1
23 PPa6 pyrophosphorylase 6 830824 At5g09650 6.9 6.8
 5.1
 7231.1
 4.3
 -0.3
 1.7
 -0.3
 -0.2
 5.2
 1.7
0.8
 4.2
2.9
 -0.8
 0.8
0.6
 4.1
0.7
 1.5
24 TSB2 tryptophan synthase beta-subunit 2 828815 At4g27070 6.7 7.2






3.6
 1.7
1.6
 2.7
1.6
 -0.0
-0.2
 1.8
1.3
 2.8
0.7
 6.9
25 GSTF9 glutathione S-transferase PHI 9 817636 At2g30860 6.7 6.2
 5.3
 211.4
 3.0
 1.9
 2.0
 2.7
 2.1
 5.9
 0.2
0.2
 2.5
0.3
 1.0
0.8
 2.4
0.8
 0.1
-0.5
 -0.0
26 EMB1144 chorismate synthase, putative / 5-enolpyruvylshikimate-3-phosphate phospholyase 841307 At1g48850 6.6 6.5
 4.8
 42.4
 0.4
 2.4
 4.5
 2.7
 0.7
 5.9
 -0.9
-1.2
 3.9
1.4
 0.8
 0.9
-1.3
 2.9
0.2
 4.9
27 DHS1 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1 830159 At4g39980 6.5 5.3
 5.9
 33.5
 1.1
 3.1
 2.9
 2.6
 1.0
 6.9
 0.1
-0.3
 2.4
1.8
 0.8
-1.0
 0.8
0.2
 1.9
-0.7
 4.2
3.3
28 CYP79B3 cytochrome P450, family 79, subfamily B, polypeptide 3 816765 At2g22330 6.3 5.3
 5.6
 379.9
 2.3
 1.9
 1.5
 1.9
 1.9
 7.3
 -0.0
-0.7



-0.2
-0.5
29 PSAT phosphoserine aminotransferase 829715 At4g35630 6.2 5.0
 5.8
 10.9
 0.9
 3.1
 4.2
 4.7
 2.1
 6.5
 0.3
0.2
 1.8
 -0.1
 -0.2
 -0.3
 3.3
30 SOT17 sulfotransferase 17 838440 At1g18590 6.2 5.0
 5.7
 93.2
 2.4
 1.8
 3.2
 2.8
 2.6
 3.9
 1.1
0.4
 1.3
1.0
 3.7
2.2
 1.6
0.1
 0.5
-0.4
 0.3
0.1
31 GGP1 Class I glutamine amidotransferase-like superfamily protein 829176 At4g30530 6.1 5.3
 5.3
 26.8
 1.5
 3.6
 4.2
 2.3
 1.3
 5.5
 0.8
0.0
 0.9
0.1
 1.5
-0.3
 -0.7
 -0.6
 1.3
0.4
32 APK APS kinase 815963 At2g14750 6.1 5.3
 5.3
 70.9
 0.4
 2.2
 3.0
 1.9
 2.3
 4.0





33 MEE32 dehydroquinate dehydratase, putative / shikimate dehydrogenase 819809 At3g06350 5.7 5.7
 4.1
 200.2
 0.5
 0.9
 3.7
 2.1
 0.5
 2.6
 1.0
 3.6
2.9
 0.7
 3.0
 1.7
 2.2
2.0
34 GSH2 glutathione synthetase 2 832797 At5g27380 5.6 4.5
 5.3
 135.7
 3.3
 1.7
 3.6
 3.0
 0.4
 2.4
 0.0
-0.3
 -0.1
-0.6
 2.2
-1.7
 1.5
 3.0
 0.9
-1.3
35 CB5-C cytochrome B5 isoform C 819277 At2g46650 5.6 4.8
 4.9
 79.9
 2.7
 1.7
 3.5
 2.9
 3.8
 4.1





36 GSH1 glutamate-cysteine ligase 828409 At4g23100 5.6 4.3
 5.3
 62.5
 1.2
 2.7
 3.9
 2.3
 2.0
 5.3
 -0.2
-0.8
 1.5
-1.0
 -0.1
 2.2
 0.9
 0.9
0.8
37 SK2 shikimate kinase 2 830108 At4g39540 5.5 5.2
 4.3
 264.5
 3.6
 0.6
 3.6
 2.6
 0.6
 1.0
 0.4
-0.4
 2.0
1.3
 0.2
 1.3
 0.9
 2.3
1.7
38 AT3G20390 endoribonuclease L-PSP family protein 821584 At3g20390 5.5 5.4
 4.0
 1662.2
 2.1
 0.2
 3.7
 2.0
 -0.3
 3.6
 1.0
0.9
 3.5
3.2
 -0.6
-0.7
 1.3
0.5
 1.9
0.6
 1.4
39 AT1G25155 Glutamine amidotransferase type 1 family protein 839099 At1g25155 5.5 5.7






2.0
 0.7
-0.1
 0.9
 0.2
 0.1
 -0.2
 4.4
1.0
40 ACS acetyl-CoA synthetase 833655 At5g36880 5.4 5.2
 4.2
 7.8
 0.8
 2.5
 4.7
 4.2
 0.1
 4.0
 1.7
1.3
 4.2
 -0.6
 1.0
-0.3
 1.1
0.1
 1.8
1.8
41 EDA9 D-3-phosphoglycerate dehydrogenase 829568 At4g34200 5.4 4.1
 5.2
 51.0
 0.9
 1.6
 3.5
 3.9
 -0.0
 4.8
 0.4
-0.5
 2.7
2.6
 -1.3
-1.7
 0.5
-0.3
 2.1
1.0
 2.2
2.2
42 AT1G25083 Glutamine amidotransferase type 1 family protein 839095 At1g25083 5.3 5.5






2.0
 0.7
-0.1
 0.9
 0.2
 0.1
 -0.2
 4.4
1.0
43 CYSC1 cysteine synthase C1 825317 At3g61440 5.3 5.1
 4.1
 254.0
 2.5
 2.0
 2.4
 3.0
 0.1
 2.3
 1.5
1.1
 0.6
0.3
 2.0
 2.4
1.4
 -0.0
-0.3
 0.8
44 AT1G24807 Glutamine amidotransferase type 1 family protein 839085 At1g24807 5.2 5.4






1.9
 0.7
-0.1
 0.9
 0.2
 0.1
 -0.2
 4.4
1.0
45 HL HAL2-like protein 835527 At5g54390 5.1 4.9
 3.9
 152.7
 0.3
 2.5
 2.8
 1.7
 0.9
 2.4
 1.6
1.2
 2.0
1.2
 0.9
-1.7
 1.1
0.5
 1.1
0.7
 0.1
46 AT1G24909 Glutamine amidotransferase type 1 family protein 839089 At1g24909 5.1 5.2






1.8
 0.7
-0.1
 0.9
 0.2
 0.1
 -0.2
 4.4
1.0
47 VTC5 GDP-L-galactose phosphorylase VITAMIN C DEFECTIVE 5 (VTC5) 835603 At5g55120 5.1 4.2
 4.6
 178.1
 0.4
 2.7
 2.2
 1.6
 1.0
 3.1
 1.9
1.6
 3.3
0.5
 -0.2
-1.1
 0.9
0.1
 -0.7
-1.6
 2.3
48 AT5G66120 3-dehydroquinate synthase 836744 At5g66120 5.1 5.1
 3.7
 135.2
 0.8
 3.1
 2.3
 2.0
 0.9
 3.2
 2.8
2.2
 2.6
 0.5
 1.2
 1.1
 3.0
49 QPT quinolinate phoshoribosyltransferase 814663 At2g01350 4.9 4.2
 4.2
 358.7
 1.5
 2.2
 3.4
 0.8
 0.7
 2.9
 2.2
1.7
 1.5
 0.5
 0.1
 2.0
 -0.8
50 CRL2 NAD(P)-binding Rossmann-fold superfamily protein 817926 At2g33600 4.8 3.9
 4.5
 200.1
 2.5
 2.8
 2.3
 1.7
 0.7
 0.6
 0.5
 1.7
-0.5
 0.4
-0.2
 1.3
 0.3
 0.6
-0.9
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