Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.4   RHC1A   RING-H2 finger C1A 
 ath-r.6   RHC1A   RING-H2 finger C1A 
 ath-m.9   RHC1A   RING-H2 finger C1A 
 ath-m.4.notissue   RHC1A   RING-H2 finger C1A 
 ath-m.4.tis   RHC1A   RING-H2 finger C1A 
 ath-m.4.str   RHC1A   RING-H2 finger C1A 
 ath-m.4.hor   RHC1A   RING-H2 finger C1A 
 ath-m.4.bio   RHC1A   RING-H2 finger C1A 
 ath-m.4.lig   RHC1A   RING-H2 finger C1A 
 ath-e.1   RHC1A   RING-H2 finger C1A 
 ath-u.4   AT3G56580   RING/U-box superfamily protein 
 gma-u.4   100813674   probable E3 ubiquitin-protein ligase RHC1A 
 gma-u.4   100787242   probable E3 ubiquitin-protein ligase RHC1A 
 gma-u.4   100787523   probable E3 ubiquitin-protein ligase RHC1A 
 ppo-u.4   7458900   probable E3 ubiquitin-protein ligase RHC1A 
 ppo-u.4   7495674   probable E3 ubiquitin-protein ligase RHC1A 
 mtr-u.4   25483287   probable E3 ubiquitin-protein ligase RHC1A 
 mtr-u.4   25480121   probable E3 ubiquitin-protein ligase RHC1A 
 mtr-u.4   11431832   probable E3 ubiquitin-protein ligase RHC1A 
 sly-u.4   101254413   probable E3 ubiquitin-protein ligase RHC1A 
 osa-u.4   4332849   probable E3 ubiquitin-protein ligase RHC1A 

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Top 50 coexpressed genes to RHC1A (ath-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 ath4141   Protein processing in endoplasmic reticulum  5 187 3.97
 ath4120   Ubiquitin mediated proteolysis  3 119 2.47
 ath3022   Basal transcription factors  2 44 2.26
 ath230   Purine metabolism  2 87 -
 ath3040   Spliceosome  2 203 -

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ath:RHC1A (RING-H2 finger C1A) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition specific* Reference

ath-u.4
for
RHC1A
ath-r.6
for
RHC1A
ath-m.9
for
RHC1A
ath-m.4.notissue
for
RHC1A
ath-m.4.tis
for
RHC1A
ath-m.4.str
for
RHC1A
ath-m.4.hor
for
RHC1A
ath-m.4.bio
for
RHC1A
ath-m.4.lig
for
RHC1A
ath-e.1
for
RHC1A
ath-u.4
for
AT3G56580
gma-u.4
for
100813674
gma-u.4
for
100787242
gma-u.4
for
100787523
ppo-u.4
for
7458900
ppo-u.4
for
7495674
mtr-u.4
for
25483287
mtr-u.4
for
25480121
mtr-u.4
for
11431832
sly-u.4
for
101254413
osa-u.4
for
4332849
1 FUT12 fucosyltransferase 12 841394 At1g49710 7.4 6.7
 6.1
 2.5
 1.5
 4.0
 2.2
 5.4
 1.1
 2.8
 1.7
1.4
 0.1
-0.0
 -1.0
-1.1
 0.1
-0.7
 1.2
 -0.3
 0.7
 0.4
 2.1
 1.5
0.5
 0.8
2 HESO1 Nucleotidyltransferase family protein 818559 At2g39740 6.4 7.1






3.5
 1.2
 -1.1
-2.0
 0.9
0.9
 1.5
0.7
 0.0
 -0.2
 0.4
 -0.3
 0.8
 -0.1
 0.4
-0.6
3 AT1G09520 uncharacterized protein 837478 At1g09520 5.7 5.0
 4.8
 68.4
 1.0
 2.4
 2.4
 2.3
 0.9
 4.2
 -0.0
-0.8
 -1.1
-2.1
 0.5
0.3
 0.8
0.2
 -2.3
-2.6
 -0.7
-3.2
 0.5
-0.5
 -0.2
-0.3
 -0.2
-1.3
 2.0
 -0.2
-0.6
4 ftsh4 FTSH protease 4 817154 At2g26140 5.4 5.9
 3.4
 113.7
 1.2
 3.0
 2.1
 2.3
 1.3
 2.3
 1.6
 0.6
-0.4
 -0.4
-1.0
 -0.4
-0.7
 2.1
 0.8
 0.4
 0.2
 1.8
 1.9
-0.4
 0.4
0.4
5 AT4G34480 O-Glycosyl hydrolases family 17 protein 829599 At4g34480 5.3 4.4
 4.8
 302.0
 1.7
 1.6
 1.9
 1.2
 0.8
 2.9
 1.1
0.8
 0.3
0.1
 4.0
1.2
 3.9
1.2
 1.5
1.1
 1.2
1.2
 1.0
0.6
 0.7
0.3
 1.5
0.4
 1.3
1.1
 0.4
6 AT5G61510 GroES-like zinc-binding alcohol dehydrogenase family protein 836272 At5g61510 5.3 5.3
 3.8
 15.9
 4.1
 3.7
 0.9
 4.3
 2.0
 1.7
 0.5
 4.4
 1.0
 1.2
 1.6
1.5
 1.6
1.3
 1.9
 1.3
 1.9
 1.5
 0.1
7 emb2444 RNA-binding (RRM/RBD/RNP motifs) family protein 816366 At2g18510 5.2 4.9
 4.1
 504.2
 0.7
 2.8
 0.8
 1.4
 1.4
 4.5
 2.5
 -1.5
-2.2
 -0.4
-0.6
 0.8
0.1
 -0.8
 -1.8
 -0.3
 -0.7
 1.0
 2.5
 -1.4
8 AT4G22740 glycine-rich protein 828370 At4g22740 5.1 5.4
 3.5
 9.9
 1.5
 4.8
 1.5
 2.8
 2.7
 0.8
 1.1
0.7
 2.6
1.6
 0.8
-0.8
 1.1
0.6
 2.5
0.9
 3.3
1.5
 0.7
-0.4
 1.2
0.5
 1.7
0.1
 2.0
0.8
 1.6
0.4
9 ATS9 non-ATPase subunit 9 839789 At1g29150 4.9 4.4
 4.1
 334.8
 2.4
 3.0
 0.1
 2.7
 3.0
 2.6
 1.5
 3.1
2.4
 1.1
0.4
 1.3
0.3
 2.4
1.3
 2.0
1.0
 1.0
-0.1
 -0.1
-0.4
 1.0
0.5
 0.5
 0.1
10 EER4 Transcription initiation factor TFIID subunit A 838316 At1g17440 4.9 5.1
 3.4
 344.7
 4.3
 1.4
 4.2
 2.8
 0.2
 3.8
 1.8
 -0.5
 -1.2
 -1.0
 2.4
2.0
 1.2
0.3
 0.4
 2.0
 1.8
 2.1
-1.3
 1.6
11 NAC2 NAC domain containing protein 2 830320 At5g04410 4.8 5.1
 3.2
 20.9
 3.4
 3.7
 2.7
 2.9
 2.8
 1.2
 0.3
-0.6
 -0.3
-0.5
 0.1
-0.4
 1.4
0.1
 3.0
1.6
 0.6
-0.1
 0.8
-0.3
 1.7
-1.3
 0.9
-0.4
 0.1
-2.1
12 SR45a RNA-binding (RRM/RBD/RNP motifs) family protein 837246 At1g07350 4.8 4.7
 3.6
 40.7
 0.1
 3.5
 -0.0
 3.0
 2.4
 2.1
 0.8
-0.2
 1.2
1.0
 1.1
0.8
 1.5
1.0
 2.9
2.2
 4.0
3.9
 1.5
0.6
 0.8
0.7
 2.4
2.1
 3.5
2.7
 0.1
-0.0
13 J3 DNAJ homologue 3 823531 At3g44110 4.8 4.5
 3.7
 120.6
 2.0
 2.9
 0.1
 3.1
 2.9
 1.9
 0.4
-0.5
 1.2
0.6
 0.6
0.2
 1.7
1.5
 2.9
2.6
 4.4
3.3
 0.9
0.1
 1.6
0.7
 3.9
2.7
 1.5
1.4
 3.2
2.4
14 TPR5 Tetratricopeptide repeat (TPR)-like superfamily protein 842097 At1g56440 4.8 5.0






1.8
 0.6
 0.2
-0.4
 0.1
-0.3
 1.8
0.2
 0.5
-0.2
 2.0
1.8
 0.5
 -1.0
 3.1
 1.4
 -1.5
15 AT2G01060 myb-like HTH transcriptional regulator family protein 814630 At2g01060 4.7 4.1
 4.0
 2553.4
 2.0
 0.0
 1.1
 2.2
 1.0
 3.7
 0.8
 2.8
0.5
 0.2
-0.4
 1.0
0.5
 1.1
1.0
 0.2
0.1
 1.8
 0.3
 4.0
 2.0
1.8
 4.8
0.2
16 PUX5 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B prime gamma 827210 At4g15410 4.7 5.4
 2.6
 271.0
 0.8
 2.9
 -0.6
 1.2
 1.3
 4.6
 3.1
1.9
 2.5
0.6
 1.3
0.5
 0.9
-0.3
 3.2
3.1
 2.1
1.8
 1.5
1.0
 2.0
0.9
 3.1
1.9
 2.4
2.2
 0.3
-0.7
17 SC35 serine/arginine-rich splicing factor-like protein, putative 836541 At5g64200 4.6 4.6
 3.4
 717.9
 0.4
 2.6
 0.6
 1.3
 -0.2
 4.1
 0.8
 -0.5
-1.2
 1.2
0.6
 1.5
1.3
 1.0
0.9
 1.8
1.7
 0.7
0.1
 0.5
-0.2
 2.0
0.8
 3.9
1.9
 1.5
0.9
18 AGO2 Argonaute family protein 840016 At1g31280 4.6 4.3
 3.7
 168.1
 2.5
 3.0
 0.2
 3.4
 3.2
 -0.4
 0.4
-1.0
 1.0
0.2
 -0.0
-0.5
 0.0
-0.6
 0.3
-0.8
 0.2
-0.8
 -0.5
-0.5
 2.3
-0.9
 -0.6
-1.8
 0.2
-0.6
 0.7
0.2
19 MEK1 MAP kinase/ ERK kinase 1 828713 At4g26070 4.6 3.6
 4.3
 1944.1
 0.4
 0.3
 0.5
 3.4
 1.3
 2.3
 1.4
0.8
 0.9
0.8
 -0.0
-0.8
 -0.6
-0.7
 1.1
-0.1
 -0.1
-0.5
 0.3
-0.9
 0.7
0.2
 -0.3
-0.6
 -1.5
 1.9
20 AT3G22270 Topoisomerase II-associated protein PAT1 821797 At3g22270 4.6 4.8






5.0
 1.0
1.0
 0.0
-0.4
 -0.2
-0.5
 0.1
-0.6
 3.0
2.5
 1.7
1.2
 0.3
-0.2
 1.5
-0.5
 2.3
1.6
 2.5
1.4
 0.9
-0.1
21 AT5G46170 F-box family protein 834659 At5g46170 4.6 5.1






-0.5
 2.4
0.8
 1.0
-1.8
 0.3
-0.7
 -0.3
-0.8
 2.0
0.9
 2.0
1.0
 2.7
 1.1
 2.5
 4.8
4.2
 1.7
0.6
22 BZIP28 Basic-leucine zipper (bZIP) transcription factor family protein 820249 At3g10800 4.5 3.5
 4.4
 54.5
 0.4
 3.6
 1.3
 0.7
 2.2
 1.8
 1.8
-0.3
 0.7
0.2
 -0.3
-1.2
 -0.3
-1.1
 2.6
1.5
 1.9
0.8
 -0.7
 1.6
 0.6
 1.0
 1.0
-0.3
23 AT1G15060 alpha/beta hydrolase family protein 838071 At1g15060 4.5 4.1
 3.7
 532.0
 0.4
 1.5
 1.6
 0.6
 0.9
 2.9
 0.9
 1.2
-0.1
 0.7
0.2
 0.3
0.2
 0.8
0.1
 0.5
0.5
 0.2
-1.3
 2.1
-0.0
 -0.3
-1.3
 1.7
0.6
 0.4
0.2
24 AT5G03285 6241161 At5g03285 4.5 4.9






1.6










25 UBQ14 Ubiquitin family protein 828148 At4g02890 4.5 4.2
 3.5
 666.0
 1.6
 1.9
 0.9
 1.1
 2.6
 2.4
 1.3
0.8
 1.4
0.9
 0.7
0.7
 0.3
0.3
 2.9
2.2
 3.0
1.7
 2.8
1.7
 2.3
1.9
 3.2
2.4
 3.6
1.4
 2.7
2.4
26 AT-HSFB2B winged-helix DNA-binding transcription factor family protein 826771 At4g11660 4.4 4.5
 3.2
 37.7
 0.1
 3.6
 1.1
 2.0
 2.9
 2.3
 0.0
-0.4
 1.7
1.7
 1.7
1.5
 1.4
0.9
 2.0
1.2
 3.3
1.8
 1.6
1.1
 2.2
1.9
 1.5
0.9
 2.3
-0.4
 -0.2
-0.7
27 SAY1 Ubiquitin-like superfamily protein 826779 At4g11740 4.3 3.9
 3.6
 60.1
 2.9
 3.6
 3.9
 1.4
 0.5
 1.9
 2.4
1.1
 0.4
-0.1
 -1.2
-1.7
 -0.7
-1.6
 1.5
0.8
 0.3
-0.4
 0.6
 1.2
 1.8
 1.3
 1.1
-1.9
28 AT2G27580 A20/AN1-like zinc finger family protein 817304 At2g27580 4.3 4.3
 3.1
 81.9
 0.5
 3.4
 0.8
 0.5
 1.9
 2.6
 -0.1
-0.5
 2.9
2.3
 1.2
0.3
 0.7
0.2
 3.3
2.5
 1.6
1.5
 2.0
1.4
 3.9
3.5
 1.4
1.1
 2.5
0.2
 1.2
0.9
29 AT1G73740 UDP-Glycosyltransferase superfamily protein 843709 At1g73740 4.3 4.1
 3.4
 37.5
 1.0
 3.5
 1.7
 1.4
 2.7
 2.5
 0.3
 0.3
 -0.4
 -0.3
 0.8
 -0.4


0.1
 -1.6
30 UBC32 ubiquitin-conjugating enzyme 32 820956 At3g17000 4.3 3.7
 3.7
 254.7
 1.7
 2.2
 2.3
 1.7
 1.4
 3.1
 1.4
 3.4
1.9
 1.3
0.8
 0.5
0.4
 3.3
2.4
 1.1
0.4
 1.2
 2.5
 2.5
 1.1
 1.2
31 AT4G28480 DNAJ heat shock family protein 828965 At4g28480 4.3 3.9
 3.5
 235.0
 0.0
 2.8
 1.1
 2.4
 2.7
 2.4
 2.7
1.7
 2.0
1.7
 1.4
0.8
 1.0
1.0
 1.3
1.2
 3.1
2.1
 2.5
1.9
 2.4
0.9
 1.5
1.0
 1.6
0.6
 1.6
0.2
32 TAF6B TBP-ASSOCIATED FACTOR 6B 841877 At1g54360 4.3 3.5
 3.8
 4885.7
 1.2
 -0.4
 0.3
 1.7
 0.4
 3.9










33 AT3G51120 zinc finger CCCH domain-containing protein 44 824276 At3g51120 4.3 3.7
 3.7
 374.4
 4.6
 2.0
 1.1
 1.2
 0.4
 5.1
 0.7
-1.2
 0.1
-0.1
 -1.6
-2.1
 -1.1
-1.5
 0.4
0.4
 -0.1
-0.6
 1.3
-0.8
 0.7
-0.4
 2.5
1.1
 0.3
0.3
 0.8
-0.4
34 AT5G12310 RING/U-box superfamily protein 831106 At5g12310 4.3 4.8
 2.5
 615.1
 1.7
 1.6
 1.6
 -0.1
 0.4
 3.6
 0.9
-0.5
 4.9
4.1
 0.8
-0.3
 0.9
-0.1
 2.1
0.8
 1.2
-0.2
 1.9
 1.2
 3.4
 2.5
1.9
 2.8
35 AT2G46735 death domain associated protein 819286 At2g46735 4.2 4.2
 3.1
 166.5
 0.4
 2.6
 1.1
 0.8
 1.2
 3.1
 0.2
 1.9
 -0.1
 -0.3
 0.9
 0.7
 -0.3
 -0.6
 0.1
 -0.5
36 TTL transthyretin-like protein 835934 At5g58220 4.2 3.8
 3.5
 720.1
 0.2
 1.5
 0.7
 2.0
 0.7
 2.6
 0.8
 2.1
0.7
 2.3
0.8
 1.9
-0.3
 5.3
 4.4
 2.4
 1.1
 2.7
 2.7
 0.4
37 HSFA1D heat shock transcription factor A1D 840125 At1g32330 4.2 3.7
 3.6
 231.5
 -0.8
 2.2
 1.6
 3.0
 1.9
 2.0
 1.8
0.5
 2.1
1.8
 1.0
0.2
 1.7
0.4
 2.3
2.3
 4.0
2.3
 0.9
0.4
 0.9
-0.1
 3.1
2.3
 3.8
1.5
38 AT3G63270 nuclease 825502 At3g63270 4.2 3.9
 3.4
 480.3
 1.4
 1.9
 -0.4
 1.1
 -0.2
 4.3
 3.0
 1.1
0.0
 1.9
1.4
 1.4
1.3
 1.5
 2.7
 3.3
 -0.7
 1.6
 1.0
 0.2
39 AT1G55530 RING/U-box superfamily protein 842000 At1g55530 4.2 4.1
 3.2
 14.6
 -0.0
 3.6
 0.9
 2.2
 2.4
 1.5
 -0.0
-0.3
 3.7
 0.2
 -0.3
 1.9
1.7
 2.9
1.8
 2.6
 3.3
 4.6
 0.8
 0.9
40 AT4G01280 Homeodomain-like superfamily protein 827903 At4g01280 4.2 4.8
 2.4
 95.9
 1.3
 3.4
 1.5
 0.4
 1.9
 2.2
 0.7
-0.3
 1.0
0.7
 -0.7
-1.0
 0.4
0.4
 2.4
1.2
 2.7
1.7
 -0.1
-0.6
 1.1
-0.9
 4.8
2.0
 1.6
1.4
 2.8
2.5
41 FRS8 FAR1-related sequence 8 844341 At1g80010 4.2 4.1
 3.1
 1065.0
 1.9
 1.3
 1.0
 1.3
 1.2
 5.7
 1.0
-1.5
 0.8
0.8
 2.4
1.3
 2.7
2.0
 2.0
1.5
 2.8
2.2
 1.2
1.2
 2.0
0.5
 2.7
0.7
 2.6
1.2
 1.5
42 AT2G21230 Basic-leucine zipper (bZIP) transcription factor family protein 816660 At2g21230 4.2 3.3
 4.0
 410.2
 2.2
 0.6
 1.7
 1.8
 0.4
 0.9
 1.5
1.3
 0.3
-0.2
 1.6
1.0
 2.7
0.5
 2.4
0.5
 1.8
0.9
 2.5
 0.8
 0.1
 -1.7
-2.4
 0.2
-1.0
43 DER1 DERLIN-1 829054 At4g29330 4.2 4.4
 2.8
 80.3
 2.2
 3.2
 -0.2
 2.6
 1.2
 2.2
 2.3
 2.4
-0.5
 1.6
-0.0
 1.7
1.0
 -0.2
 1.0
 0.6
 0.1
 -0.1
 0.0
 -0.6
44 AAC3 ADP/ATP carrier 3 828955 At4g28390 4.2 3.3
 3.9
 137.2
 2.1
 3.5
 0.1
 0.9
 0.6
 2.0
 1.7
0.1
 0.9
0.8
 2.6
2.2
 1.6
1.4
 0.6
0.5
 0.4
-0.6
 1.4
-0.3
 0.7
-0.5
 0.9
-0.5
 0.4
-0.2
 -0.5
-2.2
45 AT1G31220 Formyl transferase 840010 At1g31220 4.2 3.6
 3.6
 1041.4
 1.0
 1.5
 0.2
 2.5
 2.9
 1.9
 0.7
 0.5
-0.4
 1.1
0.0
 1.5
0.6
 0.4
 0.8
 -0.0
 -0.4
 0.1
 1.3
 -0.7
46 AT1G19860 Zinc finger C-x8-C-x5-C-x3-H type family protein 838574 At1g19860 4.2 4.5
 2.7
 3424.0
 0.1
 1.1
 1.8
 0.4
 -1.2
 3.4
 1.8
 1.0
0.3
 1.7
0.7
 0.7
-0.4
 3.8
1.8
 0.2
-0.1
 0.9
-0.8
 1.4
0.6
 1.3
-0.1
 1.7
 0.4
47 CYP81K1 cytochrome P450, family 81, subfamily K, polypeptide 1 830926 At5g10610 4.1 4.1






2.4
 0.3


4.3
0.1
 2.0
-0.0


0.3
48 AT2G42950 Magnesium transporter CorA-like family protein 818896 At2g42950 4.1 3.2
 4.0
 241.6
 2.0
 2.9
 0.1
 0.9
 0.9
 2.6
 -0.3









49 UBC11 ubiquitin-conjugating enzyme 11 820016 At3g08690 4.1 3.9
 3.2
 62.5
 1.9
 3.1
 1.5
 2.2
 3.3
 1.8
 0.5
0.4
 2.1
1.7
 1.2
0.9
 0.9
0.9
 2.5
2.3
 4.7
4.4
 1.4
0.5
 2.2
2.2
 3.9
3.7
 2.3
1.9
 3.6
2.4
50 AT5G01960 RING/U-box superfamily protein 831906 At5g01960 4.1 3.8
 3.3
 463.9
 1.1
 1.0
 1.6
 3.3
 1.2
 6.1
 0.4
 -0.1
-1.1
 -1.5
-1.7
 -1.1
-1.2
 1.6
1.3
 0.8
0.5
 1.2
0.5
 1.4
1.1
 1.6
0.8
 3.2
0.8
 0.8
-0.1
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