Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.4   TFIIB   transcription factor IIB 
 ath-r.6   TFIIB   transcription factor IIB 
 ath-m.9   TFIIB   transcription factor IIB 
 ath-m.4.notissue   TFIIB   transcription factor IIB 
 ath-m.4.tis   TFIIB   transcription factor IIB 
 ath-m.4.str   TFIIB   transcription factor IIB 
 ath-m.4.hor   TFIIB   transcription factor IIB 
 ath-m.4.bio   TFIIB   transcription factor IIB 
 ath-m.4.lig   TFIIB   transcription factor IIB 
 ath-e.1   TFIIB   transcription factor IIB 
 ath-u.4   AT3G10330   Cyclin-like family protein 
 gma-u.4   100790355   transcription initiation factor IIB 
 gma-u.4   100800061   transcription initiation factor IIB-2 
 ppo-u.4   7484022   transcription initiation factor IIB-2 
 ppo-u.4   7473606   transcription initiation factor IIB-2 
 mtr-u.4   25488804   transcription initiation factor IIB-2 
 mtr-u.4   11411517   transcription initiation factor IIB-2 
 sly-u.4   101246877   transcription initiation factor IIB-2 
 sly-u.4   101252540   transcription initiation factor IIB-2 
 sly-u.4   101266576   transcription initiation factor IIB-2 
 osa-u.4   4347689   transcription initiation factor IIB-like 

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Top 50 coexpressed genes to TFIIB (ath-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 ath4712   Circadian rhythm - plant  5 37 7.46
 ath3008   Ribosome biogenesis in eukaryotes  5 87 5.58
 ath4130   SNARE interactions in vesicular transport  3 34 4.07
 ath4120   Ubiquitin mediated proteolysis  3 119 2.47
 ath3040   Spliceosome  3 203 -

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ath:TFIIB (transcription factor IIB) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition specific* Reference

ath-u.4
for
TFIIB
ath-r.6
for
TFIIB
ath-m.9
for
TFIIB
ath-m.4.notissue
for
TFIIB
ath-m.4.tis
for
TFIIB
ath-m.4.str
for
TFIIB
ath-m.4.hor
for
TFIIB
ath-m.4.bio
for
TFIIB
ath-m.4.lig
for
TFIIB
ath-e.1
for
TFIIB
ath-u.4
for
AT3G10330
gma-u.4
for
100790355
gma-u.4
for
100800061
ppo-u.4
for
7484022
ppo-u.4
for
7473606
mtr-u.4
for
25488804
mtr-u.4
for
11411517
sly-u.4
for
101246877
sly-u.4
for
101252540
sly-u.4
for
101266576
osa-u.4
for
4347689
1 AT4G35940 uncharacterized protein 829749 At4g35940 7.1 7.5
 4.7
 108.6
 2.5
 3.5
 -0.1
 1.7
 1.5
 2.6
 1.0
0.9
 -0.5
-1.1
 0.7
0.6
 1.9
1.2
 2.1
2.0
 1.5
 3.9
 0.1
 -0.2
 0.5
2 AT3G54130 Josephin family protein 824580 At3g54130 5.8 5.8
 4.3
 26.0
 2.1
 2.9
 0.5
 1.6
 1.9
 3.0
 2.9
 1.9
1.5
 0.4
-0.4
 3.2
3.0
 3.5
1.1
 4.2
 4.7


1.1
3 AT1G15430 hypothetical protein (DUF1644) 838114 At1g15430 5.7 5.7
 4.2
 189.3
 1.8
 3.1
 0.2
 1.9
 0.5
 4.1
 1.8









4 AT5G48655 RING/U-box superfamily protein 834923 At5g48655 5.6 5.9
 3.8
 80.9
 1.3
 2.2
 -0.4
 4.0
 -0.4
 4.2
 2.0
1.0
 4.7
4.1
 1.3
0.7
 2.0
1.3
 1.5
0.7
 0.5
 0.4
 -0.6
-1.6
 0.6
-1.0
 2.1
-1.1
 1.9
0.9
5 SYP21 syntaxin of plants 21 831546 At5g16830 5.6 5.3
 4.4
 97.9
 1.5
 2.4
 1.3
 4.6
 0.1
 2.2
 1.5









6 AT5G09390 CD2-binding protein-like protein 830798 At5g09390 5.6 6.2
 3.4
 76.0
 1.0
 2.5
 2.4
 1.1
 1.1
 1.3
 3.2
 3.0
2.1
 0.8
-0.3
 2.4
1.4
 2.1
1.0
 1.9
0.9
 1.2
0.8
 -1.4
 0.1
 0.4
 0.3
7 AT5G23590 DNAJ heat shock N-terminal domain-containing protein 832425 At5g23590 5.5 5.7






4.3
 1.8
 3.6
3.0
 1.3
0.9
 2.7
 1.6
 1.1
 1.2
 0.7
0.1
 1.3
0.5
 5.1
-0.6
 2.7
8 AT1G01350 Zinc finger (CCCH-type/C3HC4-type RING finger) family protein 838964 At1g01350 5.4 5.2






0.9
 3.0
1.7
 1.9
0.4
 0.5
0.1
 0.5
 1.0
 2.0
 1.6
 -1.1
 2.2
 2.6
 3.6
9 CKA2 casein kinase II, alpha chain 2 824162 At3g50000 5.4 4.3
 5.0
 2635.9
 2.8
 0.7
 1.0
 1.4
 -0.2
 3.4
 4.2
2.8
 3.6
2.4
 1.1
0.1
 2.8
2.5
 3.3
1.5
 3.5
2.2
 3.5
2.3
 1.9
-0.1
 0.3
0.2
 4.5
2.1
 1.5
1.4
10 AT1G70590 F-box family protein 843396 At1g70590 5.3 5.0
 4.2
 178.2
 1.2
 2.6
 1.6
 2.5
 -0.3
 3.6
 4.0
 4.3
2.5
 0.5
-0.2
 0.7
 3.3
 -0.8
 -0.5
 0.1
-0.3
 1.9
0.2
 2.4
0.2
 1.2
11 AT4G27880 Protein with RING/U-box and TRAF-like domain 828901 At4g27880 5.3 5.2
 3.9
 448.0
 2.6
 1.0
 0.5
 3.5
 -1.1
 1.9
 1.5
1.3
 4.6
4.2
 1.2
1.0
 2.1
1.4
 2.3
0.7
 1.4
0.8
 0.9
0.7
 1.6
0.7
 1.4
1.1
 3.7
2.7
 3.7
2.8
12 AT4G02880 ELKS/Rab6-interacting/CAST family protein 828150 At4g02880 5.3 5.9
 3.2
 117.7
 1.5
 2.5
 -0.1
 1.7
 -0.2
 4.0
 1.7
0.6
 3.7
-0.6
 1.7
0.3
 1.1
 2.3
 1.0
 1.2
 0.2
 0.8
 4.3
 -1.2
13 SYP132 syntaxin of plants 132 830702 At5g08080 5.3 4.8
 4.3
 405.8
 0.1
 1.3
 2.2
 2.8
 0.9
 2.4
 2.0
 1.2
0.8
 0.9
0.3
 2.2
 0.1
 0.9
0.5
 2.5
1.5
 1.1
-0.1
 2.0
0.6
 3.6
-0.3
 0.3
-1.4
14 AT3G17090 Protein phosphatase 2C family protein 820966 At3g17090 5.2 4.6
 4.4
 728.4
 2.7
 0.6
 3.6
 3.2
 1.4
 2.2
 2.3
2.0
 3.0
2.1
 1.0
0.6
 2.0
1.7
 1.8
1.7
 3.6
2.9
 3.0
2.3
 1.1
0.5
 1.7
1.0
 3.1
2.4
 1.9
1.1
15 SKIP2 SKP1/ASK1-interacting protein 2 836860 At5g67250 5.2 3.5
 5.5
 244.9
 0.5
 1.7
 1.2
 4.0
 0.8
 2.6
 1.6
0.5
 4.1
2.9
 1.1
0.3
 0.3
-0.5
 -0.1
-0.4
 1.4
1.1
 0.3
0.2
 1.8
0.4
 0.2
0.2
 2.0
1.9
 1.6
16 AT1G28120 ubiquitin thioesterase otubain-like protein 839705 At1g28120 5.2 4.7
 4.3
 3273.0
 -0.6
 1.2
 0.3
 -0.8
 1.4
 2.2
 2.3
 0.6
-0.8
 0.5
-0.4
 2.8
1.7
 1.8
0.9
 2.4
 3.5
 -1.0
 -0.4
 3.0
 0.3
17 ATH9 ABC2 homolog 9 818597 At2g40090 5.2 4.5
 4.4
 173.8
 3.0
 2.6
 0.7
 1.3
 0.0
 1.2
 1.3
 -1.0
-1.0
 0.3
0.0
 3.0
 2.7
 1.7
 2.6
 0.5
 1.2
 4.3
 -0.2
18 ETL1 SNF2 domain-containing protein / helicase domain-containing protein 814740 At2g02090 5.1 5.3
 3.5
 1600.1
 1.6
 1.3
 1.7
 0.0
 0.6
 2.8
 2.0
 2.6
1.9
 1.3
0.5
 -0.2
 1.8
 1.5
 1.8
 -0.9
 -1.2
 -1.5
 0.1
19 AT5G46840 RNA-binding (RRM/RBD/RNP motifs) family protein 834728 At5g46840 5.1 4.8
 4.0
 2396.2
 2.4
 1.4
 1.6
 0.2
 -0.2
 3.7
 -0.0
 1.1
1.1
 1.4
1.3
 1.8
-2.0
 0.9
-1.9
 -0.0
 0.2
 -2.5
 0.4
 2.0
 2.0
20 CUL1 cullin 1 825648 At4g02570 5.0 5.4
 3.2
 5296.2
 1.6
 1.2
 0.4
 -0.6
 2.0
 1.5
 1.0
 1.4
1.2
 0.8
0.7
 4.8
3.0
 2.4
2.2
 3.3
1.9
 2.2
2.1
 1.4
1.4
 1.1
-0.6
 2.4
0.9
 2.4
1.0
21 RAB18 RAB GTPASE HOMOLOG B18 840987 At1g43890 5.0 5.4
 3.2
 1379.6
 0.2
 1.1
 1.0
 1.2
 1.3
 3.0
 2.4
 1.5
1.4
 1.1
0.7
 3.3
2.7
 3.8
2.4
 1.9
1.9
 4.1
3.2
 -1.0
 0.5
 0.8
22 EMB2769 Cwf15 / Cwc15 cell cycle control family protein 820510 At3g13200 4.9 4.5
 4.0
 1290.2
 1.8
 1.0
 1.5
 0.8
 0.9
 3.1
 1.9
 3.1
 0.6
 2.7
2.1
 0.4
-0.3
 0.6
 1.7
 -1.6
 0.7
 0.8
 1.7
23 AT2G23070 Protein kinase superfamily protein 816837 At2g23070 4.9 4.7
 3.8
 4079.4
 3.1
 0.7
 0.9
 0.5
 -0.5
 3.7
 4.2
2.8
 3.6
2.4
 1.1
0.1
 2.8
2.5
 3.3
1.5
 3.5
2.2
 3.5
2.3
 1.9
-0.1
 0.3
0.2
 4.5
2.1
 1.5
1.4
24 AT3G12760 defective in cullin neddylation protein 820458 At3g12760 4.9 4.6
 4.0
 4301.5
 0.2
 0.6
 0.8
 0.2
 -0.0
 1.9
 1.1
 0.2
-0.5
 1.7
0.3
 2.8
 1.3
 2.0
 3.4
 -1.3
 1.5
 3.7
 2.8
25 AT1G77250 RING/FYVE/PHD-type zinc finger family protein 844061 At1g77250 4.8 4.5
 3.8
 156.1
 2.5
 2.0
 0.6
 4.1
 1.0
 0.7
 2.2
 -1.0
-1.0
 1.4
0.3
 0.9
-1.0
 1.0
0.6
 -0.4
 -1.2
 1.6
 -0.1
 -0.3
 0.7
26 CKB3 casein kinase II beta chain 3 825196 At3g60250 4.8 4.7
 3.5
 1771.9
 -0.3
 1.0
 1.9
 0.2
 0.6
 3.9
 2.6
0.8
 2.8
2.7
 0.3
0.3
 2.6
2.3
 1.7
1.6
 3.7
3.4
 4.0
3.9
 0.2
-0.4
 2.2
-0.5
 3.0
1.4
 4.2
1.1
27 RLF reduced lateral root formation 830827 At5g09680 4.7 5.0






2.7
 0.6
 2.1
0.9
 -0.1
-0.6
 1.2
 0.9
 3.5
 3.3
 -1.2
 1.0
 2.3
 0.4
28 AT2G03470 ELM2 domain-containing protein 814876 At2g03470 4.7 4.7
 3.5
 1056.0
 2.4
 0.9
 0.2
 3.3
 0.1
 0.1
 1.1
-0.3
 -0.3
-0.4
 1.3
0.9
 1.4
0.5
 1.1
0.8
 0.1
 0.4
 -0.0
-0.0
 1.7
1.3
 1.5
1.2
 1.4
29 LOS4 P-loop containing nucleoside triphosphate hydrolases superfamily protein 824477 At3g53110 4.7 4.6
 3.6
 2828.7
 -1.6
 1.5
 1.2
 -0.3
 1.7
 2.0
 3.4
 2.7
2.5
 0.5
-0.4
 1.6
 0.8
 2.4
 2.3
 -1.1
-1.6
 -0.6
-1.5
 2.4
1.1
 0.3
30 AT3G47940 DNAJ heat shock family protein 823949 At3g47940 4.7 5.4
 2.7
 681.9
 3.0
 0.9
 1.2
 2.6
 -0.7
 1.1
 2.8
1.2
 0.7
0.4
 0.8
0.4
 1.2
0.6
 1.4
1.2
 0.9
 0.5
 0.4
-0.2
 0.6
0.3
 2.9
1.8
31 NCBP Putative cap-binding protein 831929 At5g18110 4.7 4.5
 3.6
 2861.9
 -0.5
 1.2
 0.2
 0.6
 -0.3
 0.9
 0.6
 4.6
3.1
 -0.1
-0.3
 2.5
 0.8
 0.1
 1.1
 -0.6
 1.7
 2.5
 2.6
32 AT5G27760 Hypoxia-responsive family protein 832838 At5g27760 4.6 4.6
 3.4
 146.6
 0.7
 4.0
 0.3
 0.7
 2.7
 2.2
 1.3
 2.2
1.6
 -0.4
-1.1
 2.9
1.4
 1.0
-0.2
 1.1
 1.9
 -0.1
-1.5
 -0.0
-1.0
 1.4
0.2
 1.3
1.2
33 CKB1 casein kinase II beta chain 1 834754 At5g47080 4.6 4.3
 3.6
 332.5
 -0.2
 2.0
 2.8
 0.7
 2.8
 1.4
 2.6
0.8
 2.8
2.7
 0.3
0.3
 2.6
2.3
 1.7
1.6
 3.7
3.4
 4.0
3.9
 0.2
-0.4
 2.2
-0.5
 3.0
1.4
 4.2
1.1
34 RBX1 RING-box 1 832179 At5g20570 4.6 3.9
 4.0
 8255.1
 -0.4
 0.1
 0.5
 -1.1
 0.1
 1.9
 2.3
 3.4
3.2
 1.2
0.6
 2.6
2.0
 1.1
0.0
 3.5
3.0
 4.8
4.5
 -0.9
-1.1
 -0.4
-2.1
 -0.0
-0.4
 1.1
0.3
35 AT4G15420 Ubiquitin fusion degradation UFD1 family protein 827213 At4g15420 4.6 3.8
 4.1
 438.6
 1.6
 1.9
 -0.2
 1.1
 2.2
 0.9
 1.6
 0.5
0.2
 0.9
-0.9
 0.3
 1.9
 2.3
 2.8
 -1.4
 -1.6
 -0.2
 1.0
36 AT4G01000 Ubiquitin-like superfamily protein 826414 At4g01000 4.5 4.6






1.6
 1.3
-0.3
 2.6
2.4
 0.3
-0.9
 4.1
2.6
 3.1
1.5
 1.1
 1.8
 -0.5
 1.0
 3.6
 2.3
37 LIS WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-like protein 818748 At2g41500 4.5 4.4
 3.4
 2522.3
 -0.2
 1.5
 1.4
 -0.5
 2.7
 1.8
 0.9
 0.1
0.1
 0.3
-0.4
 0.8
 0.3
 2.8
1.9
 2.0
1.3
 -0.6
 1.0
 2.7
 1.4
1.1
38 AT3G25910 MAP kinase kinase kinase, putative (DUF1644) 822188 At3g25910 4.5 4.2
 3.6
 2726.8
 0.6
 1.4
 0.5
 1.1
 0.0
 3.1
 -1.3
 5.4
3.8
 1.0
-0.4
 2.3
0.4
 2.6
-0.8
 1.9
 2.8
 0.8
-1.0
 1.7
1.1
 2.8
2.2
 1.0
39 SYP42 syntaxin of plants 42 827505 At4g02195 4.5 4.6
 3.2
 8.2
 1.8
 3.3
 2.0
 3.4
 1.3
 0.4
 1.8
0.4
 0.5
0.4
 1.3
0.7
 1.3
1.2
 0.5
-0.2
 1.4
1.2
 2.6
0.4
 0.4
-0.6
 0.7
0.4
 1.6
0.4
 2.5
40 AT3G06760 Drought-responsive family protein 819861 At3g06760 4.5 4.6
 3.1
 56.9
 1.8
 2.2
 1.0
 3.9
 0.3
 4.3
 2.1
1.5
 6.1
3.8
 0.6
0.1
 3.0
2.7
 4.1
2.0
 1.0
-1.2
 1.9
-2.3
 0.3
-0.1
 2.7
1.0
 4.3
3.0
 -0.3
41 emb1220 pre-mRNA processing ribonucleoprotein binding region-containing protein 842312 At1g60170 4.5 4.7






2.4
 2.9
 1.7
0.1
 0.1
-0.1
 2.6
0.2
 1.4
1.3
 2.5
 4.1
 -0.2
 -0.3
 1.8
 1.2
0.1
42 XPB2 homolog of Xeroderma pigmentosum complementation group B 2 834138 At5g41360 4.4 4.8






1.3
 1.4
0.1
 0.5
-0.6
 1.2
0.4
 1.9
 3.0
 2.2
 2.9
 -0.3
 -1.1
 0.6
 1.0
43 AT5G51180 alpha/beta-Hydrolases superfamily protein 835192 At5g51180 4.4 4.9
 2.8
 158.4
 -0.6
 2.5
 1.6
 0.7
 0.5
 3.1
 1.5
 1.3
-0.3
 1.3
0.3
 2.0
0.3
 2.0
1.3
 1.6
 2.0
 1.1
0.1
 1.7
-0.4
 1.6
-0.1
 1.8
0.9
44 CKA1 casein kinase alpha 1 836873 At5g67380 4.4 3.0
 4.6
 8891.1
 2.0
 -0.3
 0.6
 0.3
 -0.3
 3.0
 4.2
2.8
 3.6
2.4
 1.1
0.1
 2.8
2.5
 3.3
1.5
 3.5
2.2
 3.5
2.3
 1.9
-0.1
 0.3
0.2
 4.5
2.1
 1.5
1.4
45 ATI1 mesoderm induction early response protein 819206 At2g45980 4.4 4.6
 2.9
 1575.1
 0.3
 1.4
 -0.0
 1.5
 -0.6
 2.8
 1.1
1.0
 4.2
2.7
 0.6
-0.2
 2.0
-0.3
 1.6
1.3
 0.7
 1.3
 -0.1
-1.6
 0.9
-0.3
 1.5
-1.1
 -0.0
-0.9
46 MUB4 membrane-anchored ubiquitin-fold protein 4 precursor 822315 At3g26980 4.3 4.0
 3.5
 46.8
 -0.8
 2.6
 2.4
 2.9
 2.2
 4.7
 1.3
1.0
 2.2
1.8
 0.8
0.6
 3.9
3.8
 2.6
1.7
 1.5
0.8
 1.9
1.2
 -0.4
-1.3
 1.3
-0.2
 -0.3
-0.5
 4.3
47 RHF2A RING-H2 group F2A 832260 At5g22000 4.3 4.3
 3.2
 1012.7
 1.6
 2.2
 0.6
 1.4
 0.4
 2.3
 0.3
 3.8
3.3
 1.1
0.9
 2.7
1.5
 2.2
0.8
 2.2
-1.0
 1.8
-0.8
 -0.0
-1.1
 2.6
1.3
 1.7
0.9
 3.4
2.1
48 SYP81 syntaxin of plants 81 841599 At1g51740 4.3 4.4
 3.1
 1023.0
 4.2
 1.2
 1.8
 1.6
 0.5
 1.3
 1.8
 0.9
0.4
 0.2
0.0
 3.0
 1.3
 -0.8
 -0.4
 0.3
-0.8
 2.3
0.9
 0.4
0.0
 1.6
0.6
49 PEX19-1 peroxin 19-1 821248 At3g03490 4.3 4.5
 2.9
 1618.5
 0.5
 1.2
 0.7
 0.1
 1.2
 0.6
 2.1
0.5
 3.1
1.3
 0.4
-1.0
 5.4
-0.2
 2.3
0.7
 2.3
 2.1
 -1.0
 0.6
 0.6
 2.3
50 BPM2 BTB-POZ and MATH domain 2 819793 At3g06190 4.3 4.9
 2.5
 950.1
 2.6
 2.1
 -0.3
 3.5
 -1.4
 4.5
 1.9
0.8
 3.4
3.1
 0.8
0.7
 3.2
2.9
 1.3
0.9
 2.5
-0.9
 1.7
-0.5
 -0.5
-1.0
 0.7
-1.4
 1.3
1.0
 2.8
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