Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.4  AT5G08139  RING/U-box superfamily protein 
 ath-r.6  AT5G08139  RING/U-box superfamily protein 
 ath-m.9  AT5G08139  RING/U-box superfamily protein 
 ath-m.4.notissue  AT5G08139  RING/U-box superfamily protein 
 ath-m.4.tis  AT5G08139  RING/U-box superfamily protein 
 ath-m.4.str  AT5G08139  RING/U-box superfamily protein 
 ath-m.4.hor  AT5G08139  RING/U-box superfamily protein 
 ath-m.4.bio  AT5G08139  RING/U-box superfamily protein 
 ath-m.4.lig  AT5G08139  RING/U-box superfamily protein 
 ath-e.1  AT5G08139  RING/U-box superfamily protein 
 ath-u.4  AT5G15820  RING/U-box superfamily protein 
 ath-u.4  AT3G02340  RING/U-box superfamily protein 
 ath-u.4  AT5G60820  RING/U-box superfamily protein 
 gma-u.4  100814798  E3 ubiquitin-protein ligase CIP8 
 gma-u.4  100812037  E3 ubiquitin-protein ligase CIP8 
 gma-u.4  100794303  E3 ubiquitin-protein ligase CIP8 
 ppo-u.4  7453865  E3 ubiquitin-protein ligase CIP8 
 ppo-u.4  7487122  protein PFC0760c 
 mtr-u.4  25495490  E3 ubiquitin-protein ligase CIP8 
 mtr-u.4  25493924  uncharacterized LOC25493924 
 sly-u.4  101264712  E3 ubiquitin ligase BIG BROTHER-related 
 sly-u.4  101254448  E3 ubiquitin-protein ligase CIP8 
 sly-u.4  101246882  E3 ubiquitin-protein ligase CIP8-like 
 osa-u.4  9268797  E3 ubiquitin-protein ligase CIP8 
 osa-u.4  4345891  E3 ubiquitin-protein ligase CIP8 

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Top 50 coexpressed genes to AT5G08139 (ath-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 ath900   Terpenoid backbone biosynthesis  1 61 -
 ath3018   RNA degradation  1 113 -
 ath3015   mRNA surveillance pathway  2 119 -
 ath4141   Protein processing in endoplasmic reticulum  1 215 -
 ath4075   Plant hormone signal transduction  1 291 -

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ath:AT5G08139 (RING/U-box superfamily protein) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Condition specific* Reference

ath-u.4
for
AT5G08139


ath-r.6
for
AT5G08139


ath-m.9
for
AT5G08139


ath-m.4.notissue
for
AT5G08139


ath-m.4.tis
for
AT5G08139


ath-m.4.str
for
AT5G08139


ath-m.4.hor
for
AT5G08139


ath-m.4.bio
for
AT5G08139


ath-m.4.lig
for
AT5G08139


ath-e.1
for
AT5G08139


ath-u.4
for
AT5G15820


ath-u.4
for
AT3G02340


ath-u.4
for
AT5G60820


gma-u.4
for
100814798


gma-u.4
for
100812037


gma-u.4
for
100794303


ppo-u.4
for
7453865


ppo-u.4
for
7487122


mtr-u.4
for
25495490


mtr-u.4
for
25493924


sly-u.4
for
101264712


sly-u.4
for
101254448


sly-u.4
for
101246882


osa-u.4
for
9268797


osa-u.4
for
4345891

1 AT2G17030 F-box SKIP23-like protein (DUF295) 816206 At2g17030 7.5 6.0
7.0
35.9
2.3
1.7
1.3
2.9
3.2
7.0
4.3
3.1
6.0
1.7
6.9
1.6
1.3
0.4
4.3
0.8
1.6
-0.5
3.5
2.0
3.7
2.1
3.2
2.6
2.6
1.9
2.3
1.9
2.0
1.4
1.2
-0.2
-0.6
1.1
2 MOS2 D111/G-patch domain-containing protein 840246 At1g33520 7.4 7.3
5.5
728.4
1.1
1.6
0.4
1.3
0.3
4.3
4.5
1.2
5.8
1.1
3.8
2.4
3.6
3.5
4.9
4.9
2.8
2.2
2.7
1.5
3.5
2.4
7.6
4.5
4.1
2.7
2.2
-0.5
1.3
3 VFB2 VIER F-box protein 2 824170 At3g50080 6.9 6.1
5.8
62.7
1.0
1.8
0.5
2.9
2.5
6.6
6.7
6.6
6.9
5.0
7.4
5.2
4.7
3.5
5.1
4.8
3.0
3.0
4.4
3.3
3.0
2.8
3.1
2.7
8.5
3.5
3.2
3.0
2.3
1.8
1.5
0.4
0.1
3.7
4 AT1G70360 F-box family protein 843372 At1g70360 6.3 5.1
5.8
332.5
1.8
1.6
0.8
1.1
1.5
2.8
3.8
3.4
4.8
2.4
3.3
0.2
1.5
0.8
4.6
3.5
1.9
1.1
0.8
0.9
3.7
0.6
3.1
0.9
2.9
5.2
2.3
0.1
0.0
5 AT3G02340 RING/U-box superfamily protein 821090 At3g02340 6.1 6.2
4.4
46.8
3.8
2.2
1.7
3.3
1.1
3.5
5.2
4.4
6.1
6.0
6.1
6.0
4.7
3.0
9.2
2.8
4.7
2.5
8.5
8.5
3.4
3.4
5.6
1.2
5.6
3.1
3.1
1.2
1.8
1.8
6 AT5G60820 RING/U-box superfamily protein 836203 At5g60820 6.1 5.7
4.7
372.4
1.5
1.3
0.8
2.6
0.9
4.9
5.2
4.4
6.1
6.0
6.1
6.0
4.7
3.0
9.2
2.8
4.7
2.5
8.5
8.5
3.4
3.4
5.6
1.2
5.6
3.1
3.1
1.2
1.8
1.8
7 AT3G57340 DnaJ heat shock amino-terminal domain protein (DUF1977) 824901 At3g57340 5.9 6.3
4.0
11.3
1.3
3.0
1.7
2.9
2.2
2.1
2.2
3.7
3.6
2.0
1.6
3.0
2.8
1.4
0.9
1.5
2.3
3.2
5.3
1.9
4.3
3.5
0.6
2.0
8 AT5G28040 DNA-binding storekeeper protein-related transcriptional regulator 832874 At5g28040 5.9 5.9
4.4
266.8
0.8
1.6
1.2
3.3
2.0
4.7
4.1
3.6
6.7
3.9
8.2
4.0
3.9
3.8
5.3
4.0
3.2
2.9
3.4
3.1
3.0
2.9
3.7
1.6
2.6
1.3
1.8
0.6
2.1
1.4
0.5
0.2
1.0
0.2
9 AT3G06240 F-box family protein 819798 At3g06240 5.9 5.4
4.7
23.4
2.1
1.9
2.5
3.9
2.2
4.3
3.7
1.2
6.4
4.7
6.8
2.7
2.6
2.5
2.9
2.8
4.2
2.0
4.9
4.7
6.9
4.1
3.1
2.6
2.9
2.5
2.4
2.2
3.0
2.7
2.5
2.3


10 cPT1 Undecaprenyl pyrophosphate synthetase family protein 816264 At2g17570 5.8 5.4
4.5
10.4
1.4
4.6
4.3
2.0
1.0
1.7
2.6
5.3
3.3
0.3
-0.5
0.4
-1.4
1.4
-0.3
0.5
0.9
1.1
-0.0
0.7
0.5
0.5
1.4
1.2
0.4
-0.3
-0.1
-0.6
11 VFB1 VIER F-box protein 1 841121 At1g47056 5.6 6.3







3.6
6.7
6.6
6.9
5.0
7.4
5.2
4.7
3.5
5.1
4.8
3.0
3.0
4.4
3.3
3.0
2.8
3.1
2.7
8.5
3.5
3.2
3.0
2.3
1.8
1.5
0.4
0.1
3.7
12 AT3G16270 ENTH/VHS family protein 820873 At3g16270 5.6 5.9
3.8
30.0
1.1
3.1
1.0
2.3
3.6
3.0
1.7
1.3
1.5
1.3
0.5
2.2
1.4
0.4
0.3
1.2
1.8
1.5
1.9
2.0
1.7
1.5


13 AT1G76920 F-box family protein 844027 At1g76920 5.6 6.0
3.7
1842.0
0.1
1.6
1.6
3.1
3.1
3.8
2.5
5.6
3.1
1.7
2.4
1.3
2.4
1.8
2.6
2.5
1.6
-0.4
3.1
0.6
2.3
1.5
1.3
0.8
2.4
14 CSP3 cold shock domain protein 3 816297 At2g17870 5.6 5.1
4.6
476.1
-0.5
2.2
0.4
1.9
1.0
4.4
5.5
2.5
4.2












15 AT4G38940 Galactose oxidase/kelch repeat superfamily protein 830049 At4g38940 5.6 5.4
4.2
84.1
1.8
2.6
1.4
2.0
1.4
2.1
3.8
4.9
3.3












16 CCX4 cation calcium exchanger 4 841851 At1g54115 5.5 5.6
4.0
463.8
2.2
1.0
3.2
2.2
1.8
4.7
2.6
2.5
4.9
1.7
3.8
1.2
1.7
0.5
2.4
1.6
0.9
0.9
0.6
0.4
1.0
0.7
1.9
2.9



0.0
1.0
17 AT2G01710 Chaperone DnaJ-domain superfamily protein 814700 At2g01710 5.5 5.9
3.6
132.8
0.1
1.5
1.6
2.4
2.3
3.5
3.4
2.3
4.6
4.1
3.5
3.2
3.1
2.7
5.1
4.4
3.2
2.8
2.6
2.2
3.8
3.1
3.3
2.4
2.8
2.0
3.2
2.5
2.9
1.5
1.6
1.5
0.3
-1.2
1.0
-1.4
18 AT5G10960 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 830963 At5g10960 5.5 6.1
3.3
1935.1
1.0
0.7
2.2
3.2
0.4
6.0
3.7
3.0
4.5
1.5
3.4
3.0
3.0
2.7
3.1
2.4
6.1
4.2
2.1
2.0
2.7
2.1
1.7
1.4
3.1
0.7
1.9
1.6
4.4
2.8
2.4
1.6
1.3
-0.9
1.6
-0.1
19 MYC3 Basic helix-loop-helix (bHLH) DNA-binding family protein 834719 At5g46760 5.4 5.1
4.3
193.3
0.1
1.8
2.1
1.7
1.0
3.3
2.9
-0.2
5.0
0.7
3.5
1.0
3.5
3.2
1.1
1.0
1.1
-0.3
1.2
0.3
-0.0
-0.2
2.8
1.0
1.9
1.7
2.2
0.6
-0.4
-0.5
-0.3
-0.4
1.6
3.0
20 EXO70F1 exocyst subunit exo70 family protein F1 835106 At5g50380 5.4 5.6
3.8
110.9
2.6
2.4
2.5
1.3
1.0
4.4
5.1
6.2
4.1
2.6
1.7
5.7
5.3
2.5
2.2
4.7
2.9
5.2
3.2
3.9
2.3
4.0
3.7
1.4
0.6
-0.5
3.6
0.5
21 AT1G21200 sequence-specific DNA binding transcription factor 838715 At1g21200 5.3 5.4
3.8
541.8
1.3
1.0
1.3
3.0
2.1
4.7
3.5
1.2
4.0
-0.1
6.9
0.6
0.7
0.3
2.5
2.2
0.7
0.4
2.2
2.0
2.4
1.6
3.0
2.9
4.8
3.2
2.6
-0.3
1.3
0.1
1.4
0.6
-0.5
-0.7
1.0
0.3
22 AT2G19270 mitotic checkpoint protein PRCC-carboxy-term protein 816444 At2g19270 5.3 4.7
4.5
257.8
-0.3
3.4
1.1
2.1
1.8
3.9
4.4
4.0
2.3
3.8
3.5
4.6
3.0
1.8
1.4
3.1
2.6
2.7
1.5
0.8
2.2
2.1
0.1
-0.2
23 AT5G06560 myosin-binding protein (Protein of unknown function, DUF593) 830544 At5g06560 5.3 6.0
3.2
102.3
2.1
4.1
2.1
2.2
1.2
1.2
2.6
1.5
5.5
4.6
3.4
2.5
0.6
0.3
1.2
0.7
1.7
1.1
3.4
3.3
3.3
1.9
2.5
2.4
0.7
0.7
4.0
1.5
2.3
0.7
2.6
1.0
0.5
1.6
24 AT4G39820 Tetratricopeptide repeat (TPR)-like superfamily protein 830141 At4g39820 5.3 4.5
4.5
2497.7
0.7
2.4
1.1
1.6
2.6
2.1
2.0
2.6
5.0
2.2
2.1
2.4
2.1
1.5
1.3
4.9
5.1
1.3
3.4
1.5
2.6
2.0
0.7
1.9
25 AT5G15820 RING/U-box superfamily protein 831439 At5g15820 5.2 5.5







4.0
5.2
4.4
6.1
6.0
6.1
6.0
4.7
3.0
9.2
2.8
4.7
2.5
8.5
8.5
3.4
3.4
5.6
1.2
5.6
3.1
3.1
1.2
1.8
1.8
26 AT5G64090 hyccin 836530 At5g64090 5.2 5.2
3.8
220.8
-0.5
1.4
0.3
2.8
3.2
3.5
3.5
4.2
5.7
2.9
2.9
3.3
2.2
2.7
2.5
1.8
1.6
2.0
1.8
2.9
1.9
2.6
3.5
1.2
0.8
2.2
27 AT2G03470 ELM2 domain-containing protein 814876 At2g03470 5.1 5.4
3.5
71.3
1.3
1.3
2.0
3.7
0.1
2.0
2.8
2.6
4.8
4.0
5.5
5.1
2.0
1.5
2.7
2.1
1.6
1.1
2.5
1.8
1.5
0.9
3.0
3.9
5.3
4.0
4.2
1.7
2.4
1.4
0.1
0.5
28 VPS28-2 Vacuolar protein sorting-associated protein VPS28 family protein 825842 At4g05000 5.0 4.4
4.2
198.0
0.7
1.1
0.8
1.0
2.3
1.2
2.7
2.3
2.9
2.2
4.1
2.6
1.9
1.2
1.2
-0.1
2.1
1.1
2.3
0.6
1.6
0.5
1.1
2.2
2.5
0.9
2.5
2.2
1.8
0.4
0.9
1.1
29 AT3G28850 Glutaredoxin family protein 822517 At3g28850 4.9 4.3
4.2
484.2
2.6
1.9
2.9
1.8
2.8
1.2
1.3
-0.3
2.6
1.8
4.7
1.8
1.2
1.0
0.7
0.5
1.8
1.7
0.9
0.5
1.0
0.3
2.0
1.4
0.6
0.6
-0.0


30 AT1G75810 uncharacterized protein 843914 At1g75810 4.9 4.4
4.0
13.9
2.3
2.3
1.8
2.6
0.1
1.8
1.7
1.7
1.0
0.8
0.7
0.9
0.6
1.8
1.4
1.3
1.5
0.2
-0.5
1.0
-0.9
0.1
-1.2
1.1
-0.5


31 RHA1 Ras small GTP-binding family protein 834549 At5g45130 4.9 4.5
3.9
51.9
2.0
3.1
2.6
2.2
1.4
2.6
1.5
1.3
4.3
3.1
2.5
0.7
1.9
1.7
2.7
2.7
1.8
1.7
2.5
1.2
2.9
1.0
1.0
-0.2
0.5
-0.1
1.7
1.2
2.6
2.3
1.7
1.5
0.0
-0.2
1.2
-0.3
32 AT1G80550 Pentatricopeptide repeat (PPR) superfamily protein 844394 At1g80550 4.9 4.4
4.0
1416.8
0.9
2.4
0.3
-0.1
1.5
3.1
2.1
3.1
2.3
1.7
0.8
1.6
1.0
2.4
1.6
1.0
1.4
-0.2
1.0
1.3
-0.6
0.9
-0.3
-0.1
33 AT1G55460 DNA/RNA-binding protein Kin17, conserved region 841993 At1g55460 4.9 4.4
4.0
426.6
0.1
2.3
0.7
1.5
1.3
3.7
4.6
1.5
2.5
0.4
4.1
0.6
1.7
1.5
3.7
2.7
2.2
1.9
2.0
0.6
2.8
0.1
3.2
2.9
1.9
0.1
0.1
0.4
-0.2
34 AT1G34200 Glyceraldehyde-3-phosphate dehydrogenase-like family protein 840319 At1g34200 4.8 3.2
5.2
374.1
0.0
1.0
2.2
2.0
2.4
3.6
1.2
0.6
1.4
0.1
2.3
-1.3
0.6
-0.2
0.8
-0.0
1.2
-0.0
2.6
-1.0
0.8
-0.2
-0.6
-0.7
0.6
-0.2
0.8
0.8
0.5
0.0
1.1
1.0
1.0
-0.8
35 AT5G44320 Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) 834457 At5g44320 4.8 3.0
5.4
7404.7
-0.8
1.3
-0.1
0.2
2.5
1.5
2.9
-0.1
2.3
-2.0
2.3
0.4
3.0
2.0
1.5
1.4
1.9
1.7
0.1
0.1
1.3
0.7
1.7
3.0
1.6
0.1
0.6
0.5
0.6
36 AT1G22040 Galactose oxidase/kelch repeat superfamily protein 838809 At1g22040 4.8 4.3
4.1
1505.1
1.2
1.3
2.1
0.6
2.1
3.3
2.2
2.9
1.3
0.3
-0.1
1.5
1.2
2.6
-0.0
2.0
0.8
2.1
1.1
2.7
1.7
2.2
0.8
2.7
1.8
-0.3
0.7
-0.9
0.9
0.6
37 PEX7 peroxin 7 839800 At1g29260 4.8 4.7
3.7
2391.8
-0.1
1.2
1.6
-0.5
1.5
3.3
1.9
3.3
1.5
2.3
1.9
3.1
2.1
2.0
1.4
2.4
3.6
2.8
2.7
2.3
1.2
1.4
1.0
0.3
38 AT3G04930 DNA-binding storekeeper protein-related transcriptional regulator 819653 At3g04930 4.8 5.3







3.1
4.1
3.6
6.7
3.9
8.2
4.0
3.9
3.8
5.3
4.0
3.2
2.9
3.4
3.1
3.0
2.9
3.7
1.6
2.6
1.3
1.8
0.6
2.1
1.4
0.5
0.2
1.0
0.2
39 TOPP3 type one serine/threonine protein phosphatase 3 842708 At1g64040 4.8 5.3
3.0
918.9
1.1
1.3
2.1
0.9
1.2
1.8
3.8
2.8
4.4
2.8
4.9
4.2
1.8
1.5
1.9
1.7
1.6
1.1
2.3
1.9
1.7
1.7
2.9
1.9
2.3
2.2
2.5
1.5
4.1
1.8
2.8
2.1
0.6
-0.1
2.0
0.8
40 AT5G27460 Tetratricopeptide repeat (TPR)-like superfamily protein 832805 At5g27460 4.8 4.9
3.4
85.8
0.4
2.8
1.2
2.2
1.3
5.2
4.8
3.7
4.2
-0.1
-1.0
0.3
-0.1
-0.4
-0.9
0.8
1.2
-0.1
0.0
-1.0
-1.2
0.2
-0.6
-0.6
41 AT4G01000 Ubiquitin-like superfamily protein 826414 At4g01000 4.8 5.5







3.0
3.5
3.2
7.2
6.8
2.8
2.7
2.8
1.9
4.3
3.7
1.2
0.7
1.6
1.2
2.3
1.6
1.9
1.9
3.9
2.1
0.1
0.3
1.5
42 AT3G12350 F-box family protein 820413 At3g12350 4.8 5.2
3.0
167.8
2.1
0.9
1.0
2.2
1.2
4.1
3.1
6.4
4.2
2.5
2.2
2.7
1.6
2.2
1.3
2.5
2.7
2.2
-0.7
1.6
3.2
1.1
0.4
0.4
43 AT2G37035 uncharacterized protein 818279 At2g37035 4.7 5.0







4.1
4.0
5.6
5.2
2.8
1.9
4.7
4.1
2.5
2.4
3.6
2.9
4.7
3.1
2.7
2.7
1.9
2.1
2.7
0.3
-0.1
44 SKIP2 SKP1/ASK1-interacting protein 2 836860 At5g67250 4.7 4.9
3.2
602.6
1.3
1.0
2.7
2.5
2.1
3.5
6.7
6.6
6.9
5.0
7.4
5.2
4.7
3.5
5.1
4.8
3.0
3.0
4.4
3.3
3.0
2.8
3.1
2.7
8.5
3.5
3.2
3.0
2.3
1.8
1.5
0.4
0.1
3.7
45 AT4G13110 BSD domain-containing protein 826925 At4g13110 4.7 4.8







3.2
4.2
3.3
3.8
3.6
5.3
4.1
3.5
2.5
5.0
4.2
3.7
3.0
2.3
1.9
3.6
3.1
5.3
4.7
3.8
3.2
2.5
2.4
2.1
1.7
1.5
0.6
0.1
-0.7
1.9
0.4
46 TOPP8 Calcineurin-like metallo-phosphoesterase superfamily protein 832846 At5g27840 4.7 4.7
3.4
114.6
2.9
1.1
1.8
3.5
0.7
4.0
3.8
2.8
4.4
2.8
4.9
4.2
1.8
1.5
1.9
1.7
1.6
1.1
2.3
1.9
1.7
1.7
2.9
1.9
2.3
2.2
2.5
1.5
4.1
1.8
2.8
2.1
0.6
-0.1
2.0
0.8
47 AT1G05380 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein 837039 At1g05380 4.7 5.3
2.7
451.8
1.4
1.1
0.8
1.3
1.2
3.6
3.6
1.0
3.1
1.5
3.8
2.1
1.7
1.6
1.9
1.9
0.3
0.0
1.3
0.8
2.0
0.8
3.3
2.0
2.7
2.0
3.0
1.1
1.4
0.2
1.6
1.5
-0.4
-1.5
0.6
0.1
48 AT1G11360 Adenine nucleotide alpha hydrolases-like superfamily protein 837678 At1g11360 4.7 4.1
4.0
547.9
0.2
0.8
0.5
0.7
2.2
1.7
2.3
4.9
2.9
2.2
1.4
2.3
1.1
2.0
1.3
3.7
2.3
1.4
0.5
2.3
1.6
2.5
2.5
1.5
1.0
1.2
0.8
0.4
0.3
49 IAA10 indoleacetic acid-induced protein 10 839290 At1g04100 4.6 4.0
4.1
433.8
1.8
1.3
1.5
2.5
1.1
1.8
3.1
1.9
2.8
0.8
3.4
0.7
2.3
2.0
1.4
1.2
1.1
1.0
2.6
2.0
1.8
1.0
1.0
1.3
1.7
0.2
0.7
-0.3
2.1
-0.6
0.2
1.8
50 CDL1 Protein kinase superfamily protein 831285 At5g02800 4.6 6.0
1.9
443.3
1.9
1.3
1.7
1.3
0.4
0.8















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