Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.4   AT5G45790   Ubiquitin carboxyl-terminal hydrolase family protein 
 ath-r.6   AT5G45790   Ubiquitin carboxyl-terminal hydrolase family protein 
 ath-m.9   AT5G45790   Ubiquitin carboxyl-terminal hydrolase family protein 
 ath-m.4.notissue   AT5G45790   Ubiquitin carboxyl-terminal hydrolase family protein 
 ath-m.4.tis   AT5G45790   Ubiquitin carboxyl-terminal hydrolase family protein 
 ath-m.4.str   AT5G45790   Ubiquitin carboxyl-terminal hydrolase family protein 
 ath-m.4.hor   AT5G45790   Ubiquitin carboxyl-terminal hydrolase family protein 
 ath-m.4.bio   AT5G45790   Ubiquitin carboxyl-terminal hydrolase family protein 
 ath-m.4.lig   AT5G45790   Ubiquitin carboxyl-terminal hydrolase family protein 
 ath-e.1   AT5G45790   Ubiquitin carboxyl-terminal hydrolase family protein 
 gma-u.4   100789857   protein ROOT PRIMORDIUM DEFECTIVE 1 
 mtr-u.4   25499000   protein ROOT PRIMORDIUM DEFECTIVE 1 
 sly-u.4   101248441   protein ROOT PRIMORDIUM DEFECTIVE 1 
 osa-u.4   9267918   protein ROOT PRIMORDIUM DEFECTIVE 1 

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Top 50 coexpressed genes to AT5G45790 (ath-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 ath3013   Nucleocytoplasmic transport  1 103 -
 ath3018   RNA degradation  1 113 -
 ath4626   Plant-pathogen interaction  1 204 -

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ath:AT5G45790 (Ubiquitin carboxyl-terminal hydrolase family protein) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition specific* Reference

ath-u.4
for
AT5G45790
ath-r.6
for
AT5G45790
ath-m.9
for
AT5G45790
ath-m.4.notissue
for
AT5G45790
ath-m.4.tis
for
AT5G45790
ath-m.4.str
for
AT5G45790
ath-m.4.hor
for
AT5G45790
ath-m.4.bio
for
AT5G45790
ath-m.4.lig
for
AT5G45790
ath-e.1
for
AT5G45790
gma-u.4
for
100789857
mtr-u.4
for
25499000
sly-u.4
for
101248441
osa-u.4
for
9267918
1 AT5G38040 UDP-Glycosyltransferase superfamily protein 833784 At5g38040 8.5 5.9
 8.8
 111.5
 5.0
 2.2
 -0.5
 2.6
 -0.3
 1.5
 -0.2
-0.4
 0.9
0.4
 0.6
-0.1
 0.1
0.0
2 AT1G11710 Pentatricopeptide repeat (PPR) superfamily protein 837715 At1g11710 8.1 6.0
 8.0
 47.2
 3.7
 3.4
 -0.1
 0.8
 1.1
 1.7



3 AT2G38420 Pentatricopeptide repeat (PPR) superfamily protein 818423 At2g38420 6.9 5.5
 6.4
 128.7
 3.0
 2.6
 1.1
 0.7
 1.6
 2.6
 0.4
 3.1
 0.6
4 MEF8 Tetratricopeptide repeat (TPR)-like superfamily protein 817097 At2g25580 6.8 6.6
 5.2
 355.3
 1.4
 2.9
 0.3
 0.9
 1.0
 1.7
 1.4
1.4
 2.8
1.7
 -0.5
 1.7
5 WTF9 Ubiquitin carboxyl-terminal hydrolase family protein 818498 At2g39120 6.1 5.8
 4.9
 250.6
 1.7
 2.2
 0.5
 1.1
 0.3
 1.8
 1.1
0.6
 3.4
 0.6
 1.3
6 AT1G44810 DNA-binding storekeeper protein-related transcriptional regulator 841045 At1g44810 5.8 6.4
 3.7
 123.5
 1.2
 2.6
 0.5
 1.2
 1.0
 2.2
 2.7
2.1
 2.3
1.7
 0.9
7 AT5G48040 Ubiquitin carboxyl-terminal hydrolase family protein 834855 At5g48040 5.7 6.0






3.7
 3.0
1.2
 1.6
 1.0
 0.8
8 AT1G06580 Pentatricopeptide repeat (PPR) superfamily protein 837169 At1g06580 5.7 3.6
 6.3
 568.0
 1.1
 1.2
 -0.1
 -0.4
 -0.1
 2.6
 4.7
2.7
 4.5
3.6
 2.1
1.2
9 AT3G26850 histone-lysine N-methyltransferase 822300 At3g26850 5.7 4.8
 5.1
 254.8
 1.1
 4.7
 0.9
 1.3
 1.6
 2.9
 2.6
1.7
-1.3
 0.9
10 ABO5 ABA Overly-Sensitive 5 841625 At1g51965 5.7 5.8






1.4
 1.6
 3.2
 1.0
 0.7
11 AT5G12100 pentatricopeptide (PPR) repeat-containing protein 831083 At5g12100 5.6 3.9
 5.8
 355.8
 2.0
 1.9
 -0.4
 1.0
 0.8
 2.0
 2.2
2.0
 2.7
 0.7
12 AT4G00238 DNA-binding storekeeper protein-related transcriptional regulator 825892 At4g00238 5.6 6.1






2.5
 2.7
2.1
 2.3
1.7
 0.9
13 AT4G19650 Mitochondrial transcription termination factor family protein 827709 At4g19650 5.5 5.7
 3.9
 166.8
 0.8
 1.9
 1.4
 0.1
 -0.9
 3.3
 4.0
2.4
 3.7
2.7
 1.3
-0.0
 0.4
14 AT1G73400 Pentatricopeptide repeat (PPR) superfamily protein 843675 At1g73400 5.5 4.3
 5.2
 63.1
 2.2
 3.6
 2.2
 0.6
 1.4
 2.5
 1.7
0.3
 1.5
 -0.4
 0.4
15 AT4G28010 Tetratricopeptide repeat (TPR)-like superfamily protein 828915 At4g28010 5.4 4.8
 4.5
 4424.3
 1.2
 2.3
 -0.4
 -1.1
 -0.7
 0.5
 2.4
 3.1
 -0.2
16 AT5G65570 Tetratricopeptide repeat (TPR)-like superfamily protein 836683 At5g65570 5.3 4.3
 5.0
 249.7
 3.2
 1.7
 2.2
 0.5
 0.2
 3.7
 1.6


17 AT3G04160 U11/U12 small nuclear ribonucleoprotein 819571 At3g04160 5.3 3.7
 5.5
 115.3
 1.6
 1.6
 0.2
 0.9
 0.7
 1.9
 2.0
 3.8
 -0.2
 2.0
18 AT3G57710 Protein kinase superfamily protein 824940 At3g57710 5.3 4.8
 4.4
 118.2
 0.6
 3.3
 0.6
 0.2
 1.5
 2.5

0.2
-1.0
19 ULP1B UB-like protease 1B 828036 At4g00690 5.3 3.3
 5.8
 4544.7
 1.8
 1.3
 -1.8
 -1.0
 0.7
 0.4
 3.2
2.7
 2.3
1.9
 0.6
0.2
 2.6
0.9
20 AT4G13070 RNA-binding CRS1 / YhbY (CRM) domain protein 826921 At4g13070 5.2 4.4
 4.7
 238.5
 1.5
 2.7
 0.7
 1.2
 0.8
 2.0
 0.6
-0.4
 0.1
 0.8
 0.5
21 CPK33 calcium-dependent protein kinase 33 841492 At1g50700 5.2 4.2
 4.8
 47.6
 1.0
 2.5
 2.4
 1.7
 3.3
 1.4
 1.4
0.6
 0.1
-0.6
 1.2
1.0
 0.4
22 AT2G16880 Pentatricopeptide repeat (PPR) superfamily protein 816189 At2g16880 5.2 5.3
 3.7
 63.7
 1.2
 3.3
 -0.1
 1.2
 0.7
 3.7
 4.4
 4.1
 0.6
 2.3
23 LOH1 RNA-binding CRS1 / YhbY (CRM) domain protein 822128 At3g25440 5.2 4.1
 4.8
 1791.0
 1.7
 1.0
 -1.2
 -0.0
 -0.2
 1.4
 0.1
-0.0
 2.9
 0.9
 1.4
24 AT3G24490 Alcohol dehydrogenase transcription factor Myb/SANT-like family protein 822039 At3g24490 5.1 4.7
 4.1
 911.5
 1.4
 1.7
 0.2
 -0.1
 1.5
 3.8
 2.5
2.3
 2.8
0.9
 0.2
-0.2
 0.4
25 AT4G16470 Tetratricopeptide repeat (TPR)-like superfamily protein 827345 At4g16470 5.0 3.9
 4.8
 662.7
 2.4
 1.1
 1.7
 0.7
 0.9
 3.1

0.3
 -0.8
26 RPF1 RNA processing FACTOR 837825 At1g12700 5.0 3.6
 5.0
 1907.1
 1.4
 1.7
 2.0
 0.3
 0.1
 0.6
 4.7
2.7
 4.5
3.6
 2.1
1.2
27 AT1G74120 Mitochondrial transcription termination factor family protein 843752 At1g74120 5.0 4.3
 4.3
 134.3
 2.0
 1.8
 1.6
 1.0
 -0.3
 0.8
 2.6
 4.2
 0.7
28 AT4G08940 Ubiquitin carboxyl-terminal hydrolase family protein 826472 At4g08940 5.0 3.6
 4.9
 81.7
 1.6
 3.2
 2.1
 1.4
 0.5
 2.0
 5.2
2.7
 0.3
 0.5
 1.6
29 AT5G15010 Tetratricopeptide repeat (TPR)-like superfamily protein 831353 At5g15010 5.0 4.1
 4.5
 711.7
 1.3
 2.7
 2.3
 -0.7
 0.2
 1.1
 1.6
 0.9
 0.2
 -0.3
30 AT3G22470 Pentatricopeptide repeat (PPR) superfamily protein 821818 At3g22470 4.9 5.1






3.8
 4.7
2.7
 4.5
3.6
 2.1
1.2
31 AT4G35540 POLLEN-EXPRESSED TRANSCRIPTION FACTOR 2 829706 At4g35540 4.9 4.0
 4.4
 3615.2
 1.3
 -0.0
 0.4
 -0.5
 0.9
 3.1
 2.6
 3.1
 0.7
 1.2
32 AT2G36340 DNA-binding storekeeper protein-related transcriptional regulator 818207 At2g36340 4.8 5.0






1.9



33 AT1G12620 Pentatricopeptide repeat (PPR) superfamily protein 837818 At1g12620 4.8 3.8
 4.5
 234.8
 1.0
 2.6
 -0.1
 -0.1
 2.0
 1.8
 4.7
2.7
 4.5
3.6
 2.1
1.2
34 AT4G02820 Pentatricopeptide repeat (PPR) superfamily protein 828169 At4g02820 4.8 4.6
 3.7
 437.0
 1.4
 2.3
 0.4
 1.3
 -1.1
 2.3
 2.6
 2.6
 0.9
 -0.5
35 AT1G62680 Pentatricopeptide repeat (PPR) superfamily protein 842565 At1g62680 4.8 3.6
 4.7
 825.4
 1.2
 1.6
 -0.0
 0.2
 -0.1
 3.6
 4.7
2.7
 4.5
3.6
 2.1
1.2
36 AT5G24830 Tetratricopeptide repeat (TPR)-like superfamily protein 832552 At5g24830 4.8 4.0
 4.3
 474.8
 0.5
 3.8
 -0.6
 0.7
 0.4
 3.1
 1.7
 1.4
 0.0
37 AT3G60050 Pentatricopeptide repeat (PPR) superfamily protein 825175 At3g60050 4.8 4.8






3.2
 2.6
2.1
 3.6
2.3
 0.7
 0.7
38 AT5G16640 Pentatricopeptide repeat (PPR) superfamily protein 831526 At5g16640 4.7 3.7
 4.6
 920.8
 0.7
 2.3
 0.5
 -1.4
 0.2
 1.1
 4.7
2.7
 4.5
3.6
 2.1
1.2
39 AT5G38050 RNA polymerase II transcription elongation factor 833785 At5g38050 4.7 4.9






1.9
 0.0
-0.2
 1.0
 0.7
 0.2
40 AT1G03560 Pentatricopeptide repeat (PPR-like) superfamily protein 839458 At1g03560 4.7 2.7
 5.5
 105.9
 0.8
 2.7
 -0.7
 -0.9
 0.9
 3.6
 1.1
 3.4
 1.9
 0.5
41 AT3G57580 F-box and associated interaction domains-containing protein 824925 At3g57580 4.7 4.9






1.4
 -1.6
 1.2

42 AT1G62910 Pentatricopeptide repeat (PPR) superfamily protein 842592 At1g62910 4.7 2.9
 5.2
 886.2
 1.3
 1.2
 0.4
 -1.0
 0.9
 -0.1
 4.7
2.7
 4.5
3.6
 2.1
1.2
43 AT5G18950 Tetratricopeptide repeat (TPR)-like superfamily protein 832013 At5g18950 4.7 3.4
 4.7
 1556.8
 2.2
 1.1
 2.6
 0.6
 0.4
 1.7
2.8
 -0.0
44 AT5G65820 Pentatricopeptide repeat (PPR) superfamily protein 836711 At5g65820 4.7 3.1
 5.0
 1507.0
 1.4
 0.6
 -0.3
 0.7
 0.1
 0.3
 2.8
1.4
 5.4
-0.2
45 AT2G39300 CAP-gly domain linker 818515 At2g39300 4.6 4.2
 3.8
 1123.9
 0.0
 1.1
 1.0
 0.6
 0.9
 1.2
 -0.2
-1.0
 0.5
 -1.3
 0.8
-0.5
46 AT4G19440 Tetratricopeptide repeat (TPR)-like superfamily protein 827685 At4g19440 4.6 2.5
 5.4
 655.5
 1.0
 0.8
 0.4
 -0.2
 0.7
 2.3
 2.2
 3.4
 -0.3
47 AT2G40570 initiator tRNA phosphoribosyl transferase family protein 818652 At2g40570 4.6 4.4
 3.5
 247.5
 -1.4
 3.3
 0.1
 0.9
 1.9
 1.7
 1.7
 0.5
 0.3
 0.9
48 AT1G12300 Tetratricopeptide repeat (TPR)-like superfamily protein 837784 At1g12300 4.6 4.6






0.7
 4.7
2.7
 4.5
3.6
 2.1
1.2
49 AT1G55630 Pentatricopeptide repeat (PPR) superfamily protein 842012 At1g55630 4.6 4.0
 3.9
 1752.8
 2.5
 0.7
 0.4
 1.6
 0.8
 3.8
 2.6
2.1
 3.6
2.3
 0.7
 0.7
50 THO7 Tho complex subunit 7/Mft1p 821174 At3g02950 4.6 4.3
 3.6
 1384.6
 1.4
 2.0
 0.1
 2.2
 2.3
 2.5
 2.2
1.8
 0.5
 1.0
0.8
 0.5
-0.3
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