Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.4   PRA1.F1   prenylated RAB acceptor 1.F1 
 ath-r.6   PRA1.F1   prenylated RAB acceptor 1.F1 
 ath-m.9   PRA1.F1   prenylated RAB acceptor 1.F1 
 ath-m.4.notissue   PRA1.F1   prenylated RAB acceptor 1.F1 
 ath-m.4.tis   PRA1.F1   prenylated RAB acceptor 1.F1 
 ath-m.4.str   PRA1.F1   prenylated RAB acceptor 1.F1 
 ath-m.4.hor   PRA1.F1   prenylated RAB acceptor 1.F1 
 ath-m.4.bio   PRA1.F1   prenylated RAB acceptor 1.F1 
 ath-m.4.lig   PRA1.F1   prenylated RAB acceptor 1.F1 
 ath-e.1   PRA1.F1   prenylated RAB acceptor 1.F1 
 ath-u.4   PRA1.E   prenylated RAB acceptor 1.E 
 gma-u.4   100526887   putative PRA1 family protein 
 gma-u.4   100777017   PRA1 family protein F3 
 ppo-u.4   18096738   PRA1 family protein F3 
 ppo-u.4   18098981   PRA1 family protein E 
 mtr-u.4   25484631   PRA1 family protein E 
 mtr-u.4   25484342   PRA1 family protein F2 
 sly-u.4   101247555   PRA1 family protein F3 
 sly-u.4   101259082   PRA1 family protein F3 
 sly-u.4   101244651   PRA1 family protein F3 
 osa-u.4   4327326   PRA1 family protein F3 
 osa-u.4   107277179   PRA1 family protein F3 

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Top 50 coexpressed genes to PRA1.F1 (ath-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 ath4075   Plant hormone signal transduction  9 227 8.31
 ath909   Sesquiterpenoid and triterpenoid biosynthesis  1 23 -
 ath3410   Base excision repair  1 41 -
 ath40   Pentose and glucuronate interconversions  1 108 -
 ath940   Phenylpropanoid biosynthesis  2 128 -

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ath:PRA1.F1 (prenylated RAB acceptor 1.F1) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition specific* Reference

ath-u.4
for
PRA1.F1
ath-r.6
for
PRA1.F1
ath-m.9
for
PRA1.F1
ath-m.4.notissue
for
PRA1.F1
ath-m.4.tis
for
PRA1.F1
ath-m.4.str
for
PRA1.F1
ath-m.4.hor
for
PRA1.F1
ath-m.4.bio
for
PRA1.F1
ath-m.4.lig
for
PRA1.F1
ath-e.1
for
PRA1.F1
ath-u.4
for
PRA1.E
gma-u.4
for
100526887
gma-u.4
for
100777017
ppo-u.4
for
18096738
ppo-u.4
for
18098981
mtr-u.4
for
25484631
mtr-u.4
for
25484342
sly-u.4
for
101247555
sly-u.4
for
101259082
sly-u.4
for
101244651
osa-u.4
for
4327326
osa-u.4
for
107277179
1 LUP1 lupeol synthase 1 844237 At1g78970 7.4 6.8
 5.9
 34.8
 1.7
 2.6
 2.2
 4.6
 0.5
 4.8
 0.7
0.3
 1.1
0.2
 -0.9
-1.7
 -2.7
 -0.4
 0.1
-0.6
 0.6
0.3
 -0.6
-1.8
 -1.4
-2.2
 -0.3
-1.1

2 AT4G34770 SAUR-like auxin-responsive protein family 829629 At4g34770 7.3 5.5
 7.2
 35.0
 4.0
 3.2
 1.8
 4.3
 1.7
 6.5
 1.0
1.0
 -0.0
-0.1
 1.3
1.1
 0.6
0.4
 0.3
0.1
 -0.5
-0.5
 0.1
-1.1
 0.7
-0.1
 1.0
-0.2
 0.5
0.4

3 AT3G12710 DNA glycosylase superfamily protein 820453 At3g12710 7.3 6.2
 6.4
 7.3
 0.6
 2.1
 4.0
 5.1
 3.7
 5.7
 -0.4
-0.5
 0.2
0.0
 0.3
-0.2
 0.3
0.1
 0.1
-0.3
 0.3
0.1
 0.3
0.3
 -0.4
-0.6
 1.0
0.3
 0.8
-0.3
 -0.7
 -0.7
4 AT5G22580 Stress responsive A/B Barrel Domain-containing protein 832321 At5g22580 6.9 6.8
 5.1
 784.7
 1.3
 1.2
 -0.2
 2.3
 2.1
 5.2
 -0.1
 1.0
0.1
 0.4
-0.4
 0.3
0.0
 0.2
-0.1
 -0.6
 -0.2
 0.3
 -0.1
 -0.2
 -0.6
 -0.9
5 AT5G58390 Peroxidase superfamily protein 835952 At5g58390 6.9 6.5
 5.3
 4266.3
 3.0
 1.0
 -0.6
 1.2
 0.6
 3.7
 0.4
-0.2
 0.5
0.2
 0.4
-0.3
 0.5
0.3
 -0.6
-0.8
 -0.1
-0.3
 0.0
-0.1
 -0.4
-0.9
 -0.3
-1.0
 -0.9
-1.1
 0.4
-0.0
 0.5
0.2
6 AT3G48550 SHOOT GRAVITROPISM-like protein 824014 At3g48550 6.8 5.5
 6.3
 12.2
 1.3
 2.9
 1.7
 4.6
 1.2
 3.9
 0.8

1.3
0.2
 0.5
-0.0
 -0.9
 0.8
 0.7
 -0.9
 0.4
 0.4
 -0.7
7 AT5G50335 uncharacterized protein 835100 At5g50335 6.8 5.7
 6.0
 40.0
 0.5
 3.0
 1.9
 4.5
 1.2
 4.2
 -0.1



-0.9
 0.1




8 EXP3 Barwin-like endoglucanases superfamily protein 818341 At2g37640 6.8 6.2
 5.4
 499.7
 0.9
 2.3
 3.1
 2.7
 3.1
 3.6
 1.4
0.5
 0.9
0.7
 1.8
0.6
 0.4
0.3
 1.0
0.7
 1.5
1.4
 1.0
0.1
 0.2
0.1
 0.3
0.2
 0.9
0.8
 -0.2
-0.4
 -0.5
-0.9
9 JKD C2H2-like zinc finger protein 831919 At5g03150 6.5 6.3
 4.9
 14.3
 0.3
 2.8
 1.4
 2.8
 1.8
 6.9
 0.4
0.3
 1.7
1.4
 1.8
1.4
 0.7
0.6
 1.0
0.1
 0.2
0.0
 0.4
0.2
 0.6
-0.1
 1.7
0.5
 1.1
0.7
 2.0
0.9
 0.5
0.2
10 AT2G46640 NAD-dependent protein deacetylase HST1-like protein 819276 At2g46640 6.4 6.0
 5.0
 2747.2
 2.1
 1.7
 -0.1
 1.0
 -1.7
 2.1
 0.5

0.4
 -0.1

-0.1
-0.2
 0.6
0.0
 1.5
1.4

11 AT1G52190 Major facilitator superfamily protein 841649 At1g52190 6.3 5.7
 5.2
 119.8
 1.4
 2.6
 0.7
 2.8
 3.3
 5.3
 0.1
-0.3
 1.5
1.4
 2.0
0.8
 0.4
0.4
 1.7
0.6
 0.5
0.4
 1.6
0.8
 1.9
1.3
 1.0
0.2
 1.6
1.1
 0.5
 -0.5
12 ADF9 actin depolymerizing factor 9 829649 At4g34970 6.2 5.0
 5.7
 81.5
 3.8
 1.4
 2.1
 3.3
 1.8
 5.0
 2.0
0.7
 1.0
0.7
 -0.4
-0.5
 -0.1
-0.9
 1.5
0.5
 0.2
 -0.8
 0.2
 -0.3
 -0.9
 1.4
 1.6
13 AT3G46490 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 823802 At3g46490 5.9 5.6
 4.7
 315.9
 5.1
 3.1
 2.1
 4.8
 -1.9
 2.8
 1.8
-0.6
 0.3
-0.0
 1.4
0.3
 0.7
-1.1
 0.7
-1.6
 -1.2
 -1.8
 0.3
 -1.0
 -0.7
 -0.5
 0.5
14 SAUR27 SAUR-like auxin-responsive protein family 821121 At3g03840 5.8 4.8
 5.3
 26.5
 4.3
 3.7
 2.4
 2.2
 1.5
 1.0
 1.0
1.0
 -0.0
-0.1
 1.3
1.1
 0.6
0.4
 0.3
0.1
 -0.5
-0.5
 0.1
-1.1
 0.7
-0.1
 1.0
-0.2
 0.5
0.4

15 SGR5 C2H2-like zinc finger protein 814725 At2g01940 5.6 4.9
 4.9
 206.2
 1.2
 2.2
 2.7
 1.9
 -0.1
 5.6
 0.9
0.3
 1.3
1.1
 1.8
-0.0
 -0.0
-0.2
 0.7
-0.1
 1.1
-0.5
 0.4
-0.2
 -0.2
-0.8
 1.0
0.4
 0.5
0.3
 0.4
0.2
 0.7
0.0
16 AT5G22310 trichohyalin-like protein 832291 At5g22310 5.3 4.4
 4.7
 152.7
 2.5
 1.5
 2.0
 3.5
 2.2
 4.0
 -1.3
-1.4
 1.1
0.5
 1.3
0.6
 -0.2
-0.5
 0.1
-0.5
 0.4
0.3
 0.6
0.4
 -0.8
-1.1
 1.3
-1.1
 -0.9
-1.1
 0.4
-0.3
 0.6
-0.4
17 AT5G49170 uncharacterized protein 834976 At5g49170 5.1 3.9
 4.9
 49.3
 0.4
 3.1
 2.9
 2.8
 1.6
 2.0
 0.2
-0.1
 -0.2
-0.7
 1.9
1.2
 0.9
 -0.3
 0.1
 1.3
 0.3
 -0.4
 0.2

18 SAUR23 SAUR-like auxin-responsive protein family 831310 At5g18060 5.0 3.7
 5.0
 13.6
 2.6
 3.6
 2.8
 2.1
 1.1
 1.5
 1.0
1.0
 -0.0
-0.1
 1.3
1.1
 0.6
0.4
 0.3
0.1
 -0.5
-0.5
 0.1
-1.1
 0.7
-0.1
 1.0
-0.2
 0.5
0.4

19 AT5G48900 Pectin lyase-like superfamily protein 834948 At5g48900 4.9 4.1
 4.5
 28.0
 0.7
 2.4
 3.3
 3.0
 2.9
 2.3
 1.1
0.4
 1.3
1.1
 0.7
0.4
 0.5
0.2
 1.8
1.1
 1.4
1.0
 1.2
0.6
 -0.0
-0.1
 1.3
0.2
 1.2
0.7
 1.1
-0.4
 -0.9
-0.9
20 LSH10 LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640) 818861 At2g42610 4.9 4.0
 4.4
 1674.5
 2.6
 1.2
 1.0
 1.4
 0.6
 3.6
 3.6
1.7
 2.0
1.9
 1.0
0.9
 0.7
0.5
 1.6
1.1
 0.5
0.5
 0.9
0.5
 0.8
0.6
 0.4
0.1
 0.2
0.1
 0.1
0.1
 0.8
0.4
21 EXPA11 expansin 11 838608 At1g20190 4.8 4.0
 4.3
 58.8
 0.7
 2.0
 2.8
 2.9
 3.0
 1.8
 -0.2
 1.9
1.3
 0.1
0.0

1.0
 -0.0
 0.6
0.5
 0.9
0.5
 -0.1
-0.6
 0.4
0.2
 0.6
0.2
22 AT5G24580 Heavy metal transport/detoxification superfamily protein 832529 At5g24580 4.8 3.6
 4.7
 87.8
 -0.3
 1.8
 2.4
 3.2
 3.1
 3.2
 -1.2
 0.8
-0.7
 -0.6
-0.7
 -0.9
-1.1
 0.6
-0.2
 0.1
-0.8
 -0.3
-1.0
 0.2
 -0.2
 -0.1
 0.8
 -0.0
23 TRM25 LOW protein: M-phase inducer phosphatase-like protein 836338 At5g62170 4.8 4.2
 4.1
 87.1
 1.4
 2.9
 1.5
 3.5
 2.0
 2.1
 -0.2
-0.2
 0.8
0.1
 0.2
-0.5

0.4
0.3
 1.3
-0.2
 -0.0
 -0.7
 0.5
 1.7
 0.5
24 AT2G42900 Plant basic secretory protein (BSP) family protein 818891 At2g42900 4.7 3.4
 4.7
 22.9
 0.2
 2.3
 2.4
 2.4
 2.6
 2.5
 -0.7
 0.7
 0.1
 1.8
 1.6
 -0.3
 -0.6
 1.1
 -0.6
 -0.5
 1.5
 0.7
25 AT4G32460 choice-of-anchor C domain protein, putative (Protein of unknown function, DUF642) 829381 At4g32460 4.7 4.0
 4.0
 523.1
 -0.6
 1.3
 1.8
 3.1
 2.5
 2.7
 0.2
0.2
 0.7
0.3
 1.1
0.4
 0.5
0.2
 0.2
0.0
 -0.3
-1.4
 0.4
0.3
 1.2
0.7
 0.3
0.2
 1.0
0.1
 0.3
0.3
 0.2
0.0
26 AGP26 arabinogalactan protein 26 819405 At2g47930 4.6 3.0
 4.9
 143.2
 1.9
 2.6
 3.1
 3.4
 2.0
 1.9
 0.6










27 IAA7 indole-3-acetic acid 7 821879 At3g23050 4.6 4.0
 3.9
 64.5
 1.7
 2.5
 1.9
 3.0
 0.6
 2.7
 0.2
-0.4
 1.5
1.3
 1.3
1.1
 0.9
0.8
 2.8
2.5
 0.1
-0.1
 0.1
0.1
 0.2
0.2
 0.0
0.0
 1.7
1.2
 0.6
0.0
 0.5
-0.1
28 SAUR26 SAUR-like auxin-responsive protein family 821111 At3g03850 4.5 4.3






0.3
 1.0
1.0
 -0.0
-0.1
 1.3
1.1
 0.6
0.4
 0.3
0.1
 -0.5
-0.5
 0.1
-1.1
 0.7
-0.1
 1.0
-0.2
 0.5
0.4

29 AT3G42800 AF-like protein 823322 At3g42800 4.5 4.2
 3.5
 317.9
 1.6
 1.0
 2.7
 4.3
 1.2
 2.5
 0.2
-0.2
 1.5
0.0
 1.0
0.8
 0.8
-0.1
 1.1
0.9
 0.3
0.1
 1.2
-0.7
 0.5
-0.1
 -0.0
-0.3
 -0.2
-0.5

30 AT3G08660 Phototropic-responsive NPH3 family protein 820013 At3g08660 4.4 3.5
 4.1
 97.7
 3.5
 3.5
 1.0
 2.8
 -0.7
 3.9
 -0.0
-0.1
 0.2
-0.9
 0.5
-0.4
 0.9
 -0.7
 1.5
 0.1
 0.2
 -0.5
 -1.3
 0.4
0.4
 -0.3
-0.4
31 BEE3 BR enhanced expression 3 843719 At1g73830 4.4 3.8
 3.8
 121.3
 2.6
 2.4
 1.8
 2.6
 -0.4
 3.3
 0.3
0.0
 -0.8
 0.5
 -0.4
-1.2
 2.3
0.1
 -1.7
 0.3
 0.6
 -0.6
 0.7

32 SAUR68 SAUR-like auxin-responsive protein family 839828 At1g29510 4.4 3.3
 4.3
 28.9
 1.4
 3.6
 2.7
 1.8
 1.8
 1.3
 0.7
-0.0








-0.0
-0.1
 0.5
0.3
33 AT3G20820 Leucine-rich repeat (LRR) family protein 821630 At3g20820 4.3 4.3
 3.2
 211.3
 0.3
 2.8
 3.3
 1.9
 -2.5
 3.4
 0.5
-0.0
 2.0
1.1
 0.9
0.4
 0.1
-0.0
 1.5
0.6
 0.9
0.9
 1.0
0.9
 -0.9
-0.9
 0.7
-0.1
 1.0
0.9
 -0.2
 -0.1
34 SAUR22 SAUR-like auxin-responsive protein family 830999 At5g18050 4.3 4.2






1.4
 1.0
1.0
 -0.0
-0.1
 1.3
1.1
 0.6
0.4
 0.3
0.1
 -0.5
-0.5
 0.1
-1.1
 0.7
-0.1
 1.0
-0.2
 0.5
0.4

35 AT4G11290 Peroxidase superfamily protein 826731 At4g11290 4.3 4.5
 2.9
 1320.3
 -0.4
 0.4
 0.1
 1.0
 1.9
 3.0
 0.7
0.5
 0.8
0.1
 1.6
1.1
 0.6
0.2
 -0.1
-0.4
 -0.0
-0.2
 -0.4
-1.0
 0.5
0.1
 0.7
0.5
 1.2
0.9
 -0.6
 -0.5
36 HB-3 homeobox 3 831367 At5g15150 4.3 5.0
 2.4
 3273.5
 -0.8
 0.3
 0.5
 0.6
 1.9
 4.4
 0.8
0.4
 1.5
1.4
 0.8
0.6
 0.1
0.0
 0.0
-0.2
 0.7
-0.2
 0.8
0.2
 -0.2
-0.4
 0.8
0.2
 0.4
-0.0
 0.4
-0.6
 0.3
-0.5
37 AT4G30180 uncharacterized protein 829141 At4g30180 4.3 4.6






4.0
 -1.0
 -0.1
-0.2
 0.0
-0.2
 0.6
 -0.9
 -0.3
 -1.0




38 ENODL8 early nodulin-like protein 8 842772 At1g64640 4.2 2.9
 4.4
 30.7
 1.8
 2.6
 2.5
 2.8
 2.4
 3.7
 -0.2
 0.2
0.1
 0.9
-0.8
 0.4
 0.0
 0.6
 0.8
 0.2
 1.3
 0.7
 1.0
 -0.0
39 P1R3 uncharacterized protein 822596 At3g29370 4.2 3.2
 4.0
 133.9
 -0.1
 1.9
 2.2
 1.6
 2.7
 2.3
 -0.3
-0.7
 -1.6
 -0.3








40 SAUR29 SAUR-like auxin-responsive protein family 28718697 At3g03820 4.2 4.2






0.6
 1.0
1.0
 -0.0
-0.1
 1.3
1.1
 0.6
0.4
 0.3
0.1
 -0.5
-0.5
 0.1
-1.1
 0.7
-0.1
 1.0
-0.2
 0.5
0.4

41 AT4G34790 SAUR-like auxin-responsive protein family 829631 At4g34790 4.1 4.2






3.0
 1.0
1.0
 -0.0
-0.1
 1.3
1.1
 0.6
0.4
 0.3
0.1
 -0.5
-0.5
 0.1
-1.1
 0.7
-0.1
 1.0
-0.2
 0.5
0.4

42 RLP29 receptor like protein 29 818880 At2g42800 4.1 3.6
 3.5
 2638.9
 -0.1
 1.2
 -0.1
 0.5
 1.2
 3.0
 -1.0
 -1.6
 -0.9
 -0.7
 -0.5

-1.8
 -1.1
 -0.7
 0.2
-0.1
 0.3
0.0
43 AT5G14090 regulator of nonsense transcript protein 831258 At5g14090 4.1 2.8
 4.2
 4434.3
 4.3
 -0.3
 -0.1
 1.2
 -1.8
 1.4
 -0.7
 -0.0
 -0.3

-1.2
-1.2
 -0.1
-0.5
 -0.1
 -0.7
 0.5
 -0.2
 -0.3
44 AT4G22490 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 828344 At4g22490 4.1 3.4
 3.6
 165.7
 2.2
 2.4
 1.5
 1.2
 1.7
 1.0
 0.2










45 AT1G29500 SAUR-like auxin-responsive protein family 839827 At1g29500 4.0 3.2
 3.8
 41.7
 1.3
 4.0
 2.8
 1.7
 1.5
 0.6
 0.7
-0.0








-0.0
-0.1
 0.5
0.3
46 LNG1 longifolia1 831411 At5g15580 4.0 3.6
 3.4
 50.6
 -0.2
 2.2
 3.4
 3.8
 2.2
 2.7
 -1.2










47 BEE1 BR enhanced expression 1 838421 At1g18400 4.0 3.0
 3.9
 166.0
 2.0
 1.8
 2.2
 2.9
 0.8
 2.6
 0.3
0.0
 -0.8
 0.5
 -0.4
-1.2
 2.3
0.1
 -1.7
 0.3
 0.6
 -0.6
 0.7

48 CYP708A3 cytochrome P450, family 708, subfamily A, polypeptide 3 844185 At1g78490 4.0 3.2
 3.7
 5023.6
 1.6
 0.4
 0.2
 0.7
 0.3
 2.2
 -0.2
-0.2










49 AT4G24275 uncharacterized protein 828530 At4g24275 4.0 4.0






4.1
 -0.3
 -0.3
 -0.9








50 AT1G75590 SAUR-like auxin-responsive protein family 843894 At1g75590 4.0 3.4
 3.4
 2114.5
 3.0
 1.1
 0.3
 1.4
 2.1
 2.5
 1.8
1.4
 1.7
0.8
 0.8
0.5
 2.2
0.5
 0.8
0.4
 0.9
0.3
 -0.3
-0.6
 0.7
0.1
 1.8
1.4
 -0.0
-0.0
 0.3
 0.5
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