Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.4   AT1G03250   R3H domain protein 
 ath-r.6   AT1G03250   R3H domain protein 
 ath-m.9   AT1G03250   R3H domain protein 
 ath-m.4.notissue   AT1G03250   R3H domain protein 
 ath-m.4.tis   AT1G03250   R3H domain protein 
 ath-m.4.str   AT1G03250   R3H domain protein 
 ath-m.4.hor   AT1G03250   R3H domain protein 
 ath-m.4.bio   AT1G03250   R3H domain protein 
 ath-m.4.lig   AT1G03250   R3H domain protein 
 ath-e.1   AT1G03250   R3H domain protein 
 gma-u.4   100785058   uncharacterized LOC100785058 
 ppo-u.4   112325517   R3H domain-containing protein 4-like 
 ppo-u.4   18108282   R3H domain-containing protein 4 
 mtr-u.4   11431198   R3H domain-containing protein 4 
 osa-u.4   4351484   uncharacterized LOC4351484 
 osa-u.4   4349765   uncharacterized LOC4349765 

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Top 50 coexpressed genes to AT1G03250 (ath-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 ath4145   Phagosome  2 83 -
 ath3008   Ribosome biogenesis in eukaryotes  2 96 -
 ath3013   Nucleocytoplasmic transport  2 103 -
 ath190   Oxidative phosphorylation  1 170 -
 ath3040   Spliceosome  3 203 -

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ath:AT1G03250 (R3H domain protein) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition specific* Reference

ath-u.4
for
AT1G03250
ath-r.6
for
AT1G03250
ath-m.9
for
AT1G03250
ath-m.4.notissue
for
AT1G03250
ath-m.4.tis
for
AT1G03250
ath-m.4.str
for
AT1G03250
ath-m.4.hor
for
AT1G03250
ath-m.4.bio
for
AT1G03250
ath-m.4.lig
for
AT1G03250
ath-e.1
for
AT1G03250
gma-u.4
for
100785058
ppo-u.4
for
112325517
ppo-u.4
for
18108282
mtr-u.4
for
11431198
osa-u.4
for
4351484
osa-u.4
for
4349765
1 AT5G11900 Translation initiation factor SUI1 family protein 831063 At5g11900 7.1 6.7
 5.6
 188.1
 -0.2
 1.6
 1.1
 1.0
 1.4
 0.1
 -0.5
-1.2
 0.9
-0.7
 0.4
-0.6
 0.6
 1.3
 2.4
2 CCT2 phosphorylcholine cytidylyltransferase2 827179 At4g15130 5.6 5.9
 3.8
 137.3
 1.7
 3.6
 1.6
 1.5
 1.2
 3.7
 1.6
1.3
 1.0
0.7
 1.2
1.0
 4.1
0.3
 0.6
-0.3
 3.1
0.8
3 PHF1 phosphate transporter traffic facilitator1 824384 At3g52190 5.5 4.9
 4.7
 580.0
 0.1
 1.2
 1.5
 0.8
 1.8
 2.2
 2.2
1.5
 1.8
1.2
 1.8
1.2
 1.2
 0.6
-1.0
 0.5
-0.5
4 AUG1 HAUS augmin-like complex subunit 818733 At2g41350 5.5 5.1
 4.5
 1199.3
 -0.6
 1.1
 0.4
 0.9
 1.2
 2.6
 2.6
2.0
 1.3
 1.1
 2.6
 0.4
 0.8
5 FMN/FHY riboflavin kinase/FMN hydrolase 828232 At4g21470 5.5 5.7
 3.8
 171.5
 1.1
 1.6
 4.3
 1.6
 3.5
 1.2
 1.5
 0.7
0.7
 1.5
0.5
 -0.2
 2.3
 2.0
6 SPX2 SPX domain-containing protein 2 (SPX2) 817207 At2g26660 5.2 5.4
 3.7
 142.0
 0.9
 2.1
 3.0
 1.8
 1.4
 3.4
 11.0
10.3
 0.8
0.6
 0.7
0.6
 4.7
 2.9
 6.0
7 UCH2 Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 842876 At1g65650 5.1 4.1
 4.8
 84.6
 -0.2
 2.4
 0.8
 1.0
 3.7
 3.4
 0.1
-0.0
 1.0
0.3
 0.3
0.1
 0.3
 1.3
-2.7
 2.5
-1.4
8 AT4G35360 pantothenate kinase 829689 At4g35360 5.1 4.9
 3.9
 273.5
 1.0
 1.8
 1.4
 1.0
 1.9
 2.2
 0.9
0.9
 2.1
-1.1
 2.0
-1.6
 0.4
-0.2
 1.1
 2.0
9 SEC22 Synaptobrevin family protein 837737 At1g11890 5.0 4.1
 4.5
 589.7
 0.7
 1.0
 0.8
 2.2
 1.1
 2.0
 0.7
0.5
 2.2
1.4
 2.5
1.5
 -0.9
 0.6
-0.4
 1.5
0.1
10 SAT32 interferon-related developmental regulator family protein / IFRD protein family 839669 At1g27760 4.8 3.7
 4.7
 10.1
 2.2
 3.9
 4.1
 2.6
 1.7
 1.2
 6.5
5.7
 1.3
0.8
 1.4
1.2
 0.8
 3.1
-0.3
 3.8
0.9
11 TON1A tonneau family protein 824665 At3g55000 4.8 4.4
 3.9
 525.8
 -0.4
 1.3
 0.6
 1.6
 1.3
 1.2
 3.9
1.8
 0.3
-1.1
 0.4
-0.6
 1.4
 -0.6
-0.7
 0.7
0.1
12 AT1G43860 sequence-specific DNA binding transcription factor 840982 At1g43860 4.8 4.3
 4.1
 248.6
 -0.5
 2.0
 0.5
 1.3
 0.5
 5.2
 -0.4
-1.2
 -0.3
-1.6
 -0.1
-1.3
 -1.0
 -1.2
 -1.2
13 CRL2 NAD(P)-binding Rossmann-fold superfamily protein 817926 At2g33600 4.8 3.7
 4.5
 761.6
 -1.2
 1.7
 1.2
 1.7
 0.7
 0.0
 0.9
 1.0
-0.5
 1.3
-0.2
 0.9
-0.3
 1.3
0.3
 0.8
-0.2
14 NBP35 nucleotide binding protein 35 835169 At5g50960 4.8 4.0
 4.3
 83.0
 0.4
 1.1
 1.3
 2.7
 1.5
 3.5
 1.6
0.1
 0.3
 0.7
 0.3
 -0.6
-0.7
 -0.3
-0.4
15 SPX1 SPX domain-containing protein 1 832137 At5g20150 4.8 4.3
 3.9
 660.9
 1.4
 1.9
 2.5
 1.0
 -1.2
 3.6
 11.0
10.3
 0.8
0.6
 0.7
0.6
 4.7
 2.9
 6.0
16 AT3G07170 Sterile alpha motif (SAM) domain-containing protein 819904 At3g07170 4.7 4.0
 4.2
 457.3
 -0.3
 1.4
 0.4
 0.3
 1.8
 1.8
 2.5
2.4
 1.1
0.1
 0.9
0.5
 1.2
 1.1
 0.3
17 AT2G38740 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 818456 At2g38740 4.7 4.1
 4.1
 229.7
 0.6
 2.4
 2.6
 2.0
 1.2
 1.3
 5.0
4.0
 1.0
0.9
 1.2
0.6
 1.8
 3.2
1.2
 2.5
-0.8
18 DRL1 KTI12-like, chromatin associated protein 837946 At1g13870 4.7 4.8
 3.3
 217.4
 0.0
 2.3
 1.1
 1.8
 0.0
 3.1
 -1.4
 0.2
 -0.0
 0.6
-0.0
 0.8
0.0
 0.2
0.0
19 AT1G02410 cytochrome c oxidase assembly protein CtaG / Cox11 family 839364 At1g02410 4.6 3.7
 4.4
 3.0
 1.9
 2.2
 2.2
 2.4
 1.8
 1.8
 1.6
0.1
 0.7
 0.9
 -0.4
 -0.0
 0.7
20 AT1G09920 TRAF-type zinc finger-like protein 837524 At1g09920 4.6 3.9
 4.1
 156.0
 0.3
 3.2
 2.4
 3.6
 1.8
 4.2
 3.3
2.7
 1.7
 2.3
 1.8
1.2
 0.6
0.6
 2.2
1.6
21 AT4G11790 Pleckstrin homology (PH) domain superfamily protein 826785 At4g11790 4.6 3.2
 4.7
 558.0
 -0.6
 1.4
 1.1
 1.2
 0.7
 0.3
 0.8
0.0
 0.5
0.1
 1.1
0.3
 0.5
 -0.1
 -0.6
22 AT1G17130 coiled-coil protein (DUF572) 838283 At1g17130 4.5 3.6
 4.3
 43.1
 1.0
 2.5
 1.0
 1.8
 1.5
 3.3
 1.7
1.0
 1.8
1.3
 1.8
1.7
 1.6
1.4
 0.4
 0.1
23 MSL2 MSCS-like 2 830913 At5g10490 4.5 4.5
 3.3
 1381.7
 1.1
 1.5
 2.5
 0.7
 1.0
 2.2
 1.8
1.6
 2.4
2.2
 2.3
2.1
 1.8
0.3
 0.1
 0.3
24 AT5G52580 RabGAP/TBC domain-containing protein 835335 At5g52580 4.5 4.5
 3.3
 1820.6
 0.5
 2.7
 1.5
 1.7
 -0.3
 2.3
 1.6
0.9
 2.3
1.9
 2.5
1.8
 1.6
 1.4
 1.0
25 ACBP1 acyl-CoA binding protein 1 835428 At5g53470 4.5 3.9
 3.9
 407.2
 0.3
 1.1
 1.2
 2.3
 0.4
 1.7
 1.4
0.1
 1.2
0.9
 1.0
0.9
 -0.1
 -0.6
 1.1
26 FYPP3 flower-specific, phytochrome-associated protein phosphatase 3 821536 At3g19980 4.5 5.5
 2.2
 52.5
 0.1
 5.3
 1.1
 1.8
 2.1
 1.5
 1.7
0.8
 1.9
0.5
 2.6
1.2
 3.1
 -1.4
 -0.7
27 TOC34 translocon at the outer envelope membrane of chloroplasts 34 830382 At5g05000 4.5 4.2
 3.6
 2886.0
 -1.6
 1.0
 0.2
 -0.6
 2.6
 1.3
 1.5
-0.5
 2.1
1.7
 1.7
1.6
 0.6
0.1
 -0.1
 -0.7
28 AT3G52220 leukocyte immunoglobulin-like receptor family A protein 824387 At3g52220 4.5 5.6
 2.1
 1528.8
 1.5
 0.5
 0.8
 1.8
 0.9
 3.2
 1.8
1.7
 1.5
1.0
 1.5
0.6
 2.0
 -0.3
 1.3
29 RABG3c RAB GTPase homolog G3C 820855 At3g16100 4.4 3.9
 3.7
 11049.8
 -0.6
 -0.4
 -0.2
 -0.9
 1.0
 0.1
 5.0
4.4
 1.5
1.4
 1.8
1.4
 5.7
3.2
 2.8
0.2
 2.8
0.2
30 AT2G38730 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein 818455 At2g38730 4.4 2.7
 4.8
 285.7
 0.2
 1.2
 1.2
 0.2
 1.2
 1.6
 0.9
0.0
 0.5
0.2
 0.2
-0.0
 0.4
 -0.2
 -0.2
31 THO1 nuclear matrix protein-like protein 830846 At5g09860 4.3 4.0
 3.6
 378.6
 -0.5
 2.1
 1.0
 0.1
 0.6
 4.6
 0.6
 0.2
-0.1
 0.9
0.6
 1.4
 -1.8
 -1.5
32 AT1G05430 uncharacterized protein 837044 At1g05430 4.3 3.3
 4.2
 4578.4
 -0.7
 -1.3
 0.5
 -0.3
 1.0
 2.4
 1.6
1.0
 2.0
-0.5
 1.8
0.4
 0.7

33 AT1G63170 Zinc finger, C3HC4 type (RING finger) family protein 842621 At1g63170 4.3 4.7
 2.8
 3440.4
 0.8
 0.4
 -0.2
 1.1
 1.5
 0.8
 3.2
1.8
 1.7
0.5
 1.0
-0.1
 0.2
0.1
 2.1
-0.7
 0.7
-0.8
34 SRO1 uncharacterized protein 818116 At2g35510 4.3 4.9
 2.5
 120.6
 1.1
 2.4
 0.8
 2.3
 1.0
 2.2
 1.4
0.9
 1.6
1.2
 1.8
1.2
 0.5
0.2
 1.2
 0.1
35 AT1G52730 Transducin/WD40 repeat-like superfamily protein 841706 At1g52730 4.3 4.6
 2.8
 1328.7
 -0.1
 1.0
 0.6
 0.5
 0.9
 2.1
 -0.4
-1.0
 0.6
-1.6
 1.0
-1.1
 0.5
 -0.6
-0.8
 -0.5
-0.7
36 eIF6A Translation initiation factor IF6 824728 At3g55620 4.3 4.3
 3.1
 377.8
 0.8
 2.0
 0.5
 0.7
 1.5
 0.1
 1.0
0.3
 0.7
-0.2
 1.0
0.3
 0.3
 1.6
-0.9
 0.5
0.3
37 AT2G39170 MEF2BNB-like protein 818502 At2g39170 4.3 3.9
 3.5
 492.1
 1.3
 1.8
 1.0
 0.1
 1.5
 3.7
 2.5
0.2
 1.1
0.5
 1.1
0.2
 0.9
0.1
 1.6
 1.8
38 AT4G27680 P-loop containing nucleoside triphosphate hydrolases superfamily protein 828882 At4g27680 4.3 3.7
 3.6
 500.5
 1.6
 1.1
 1.7
 1.1
 2.3
 0.5
 2.4
1.9
 1.4
-0.3
 1.4
-0.7
 0.4
0.1
 -1.0
 -0.6
39 TEX1 Transducin/WD40 repeat-like superfamily protein 835712 At5g56130 4.3 4.0
 3.4
 1340.2
 -0.3
 1.4
 0.4
 -0.3
 2.0
 0.0
 0.3
-0.4
 1.7
 1.3
 0.9
 -0.6
 0.4
40 AT1G23220 Dynein light chain type 1 family protein 838931 At1g23220 4.2 4.9
 2.5
 93.0
 -0.5
 1.3
 1.6
 3.2
 1.4
 3.5
 0.6
0.5
 -1.9
 -1.6
 -0.6
-0.7
 -0.4
-1.0
 0.2
-0.2
41 AT2G14110 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 815897 At2g14110 4.2 4.3
 3.0
 177.3
 2.4
 2.1
 1.7
 1.0
 1.4
 1.2
 1.6
1.0
 1.1
 1.4
 -0.2
-0.8
 0.8
-0.4
 0.7
0.5
42 AT3G26730 RING/U-box superfamily protein 822285 At3g26730 4.2 4.5
 2.9
 703.1
 0.4
 3.4
 2.1
 -0.3
 0.9
 1.3
 3.8
1.8
 0.8
 0.9
 1.5
 1.8
 1.0
43 AT4G39150 DNAJ heat shock N-terminal domain-containing protein 830070 At4g39150 4.2 4.8
 2.5
 4809.2
 -0.6
 0.7
 0.5
 0.1
 1.5
 1.9
 1.7
1.3
 2.0
1.5
 1.9
1.4
 1.8
 1.1
 0.3
44 AT4G17720 RNA-binding (RRM/RBD/RNP motifs) family protein 827493 At4g17720 4.2 4.6
 2.7
 117.2
 0.4
 2.8
 1.9
 2.1
 3.1
 3.9
 2.6
2.2
 1.6
0.3
 1.7
0.4
 2.6
0.6
 1.1
1.0
 0.9
0.7
45 ZML2 ZIM-LIKE 2 841585 At1g51600 4.2 2.8
 4.5
 309.9
 1.2
 2.7
 0.9
 1.4
 0.7
 -0.4
 1.5
1.5
 2.1
0.4
 2.0
0.6
 1.2
-0.4
 1.7
1.0
 0.8
0.7
46 TOM20-4 translocase of outer membrane 20-4 834094 At5g40930 4.2 4.4
 2.9
 1021.2
 3.4
 0.2
 0.9
 0.7
 1.7
 1.8
 1.4
0.5
 1.8
0.2
 2.3
0.3
 0.4
-0.5
 -0.3
 -0.7
47 CID3 CTC-interacting domain 3 841857 At1g54170 4.2 3.6
 3.6
 272.3
 2.8
 1.7
 1.3
 2.4
 2.2
 -0.4
 0.3
0.2
 -0.3
-1.0
 0.3
-0.3
 0.1
-0.5
 -1.8
 -0.9
48 AT3G09890 Ankyrin repeat family protein 820147 At3g09890 4.2 2.9
 4.4
 1033.5
 -0.3
 1.1
 0.3
 0.9
 1.3
 2.6
 -1.0
-1.5
 1.7
-1.1
 1.4
-1.8
 0.2
 -0.3
 -0.8
49 AT1G19200 cyclin-dependent kinase, putative (DUF581) 838503 At1g19200 4.2 3.8
 3.4
 207.7
 1.6
 1.5
 4.3
 1.6
 -0.5
 -0.2
 0.5
0.5
 -0.1
 -0.0
 2.1
0.8

50 CRF8 Integrase-type DNA-binding superfamily protein 843453 At1g71130














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