[←][→] sly   544073 Gene
functional annotation
Function   phytoene desaturase      
GO BP
GO CC
GO MF
KEGG sly00906 [list] [network] Carotenoid biosynthesis (36 genes)
Protein NP_001234095.1  XP_010318412.1  XP_010318414.1  XP_019068139.1 
BLAST NP_001234095.1  XP_010318412.1  XP_010318414.1  XP_019068139.1 
Orthologous [Ortholog page] PDS1 (gma)  PDS3 (ath)  LOC4331854 (osa)  LOC7462030 (ppo)  LOC7462440 (ppo)  LOC11432737 (mtr)  LOC100037655 (tae)  LOC100127420 (gma)  LOC103835193 (bra)  PDS (bra)  LOC123084692 (tae)  LOC123098691 (tae)  LOC123449634 (hvu) 
Subcellular
localization
wolf
chlo 9  (predict for NP_001234095.1)
plas 6,  vacu 1,  E.R. 1,  E.R._vacu 1  (predict for XP_010318412.1)
chlo 9  (predict for XP_010318414.1)
chlo 9  (predict for XP_019068139.1)
Subcellular
localization
TargetP
chlo 6,  mito 3  (predict for NP_001234095.1)
other 9,  mito 3  (predict for XP_010318412.1)
chlo 6,  mito 3  (predict for XP_010318414.1)
chlo 6,  mito 3  (predict for XP_019068139.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00906 Carotenoid biosynthesis 4
sly00500 Starch and sucrose metabolism 3
sly00900 Terpenoid backbone biosynthesis 3
sly00051 Fructose and mannose metabolism 2
Genes directly connected with pds on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
9.4 zds zeta-carotene desaturase [detail] 543629
8.6 LOC101247247 protein ORANGE-LIKE, chloroplastic [detail] 101247247
7.6 ispE 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic/chromoplastic [detail] 543658
6.1 CRTISO prolycopene isomerase, chloroplastic [detail] 101267857
5.9 LOC101252603 NAD(P)-linked oxidoreductase superfamily protein [detail] 101252603
5.8 LOC101257661 alpha-amylase 3, chloroplastic [detail] 101257661
4.9 LOC101243844 uncharacterized LOC101243844 [detail] 101243844
Coexpressed
gene list		 [Coexpressed gene list for pds]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 544073      
Refseq ID (protein) NP_001234095.1 
XP_010318412.1 
XP_010318414.1 
XP_019068139.1 


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