[←][→] ath   At4g14210 Gene
functional annotation
Function   phytoene desaturase 3      
GO BP
GO:0016120 [list] [network] carotene biosynthetic process  (7 genes)  IDA  
GO:0016117 [list] [network] carotenoid biosynthetic process  (21 genes)  IDA  
GO CC
GO:0009509 [list] [network] chromoplast  (3 genes)  ISS  
GO:0009534 [list] [network] chloroplast thylakoid  (415 genes)  HDA  
GO:0009941 [list] [network] chloroplast envelope  (582 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA ISM TAS  
GO MF
GO:0016166 [list] [network] phytoene dehydrogenase activity  (1 genes)  IDA  
KEGG ath00906 [list] [network] Carotenoid biosynthesis (29 genes)
Protein NP_001319934.1  NP_001329033.1  NP_193157.1 
BLAST NP_001319934.1  NP_001329033.1  NP_193157.1 
Orthologous [Ortholog page] pds (sly)  PDS1 (gma)  LOC4331854 (osa)  LOC7462030 (ppo)  LOC7462440 (ppo)  LOC11432737 (mtr)  LOC100037655 (tae)  LOC100127420 (gma)  LOC103835193 (bra)  PDS (bra)  LOC123084692 (tae)  LOC123098691 (tae)  LOC123449634 (hvu) 
Subcellular
localization
wolf
chlo 7,  cyto 3  (predict for NP_001319934.1)
chlo 7,  cyto 3  (predict for NP_001329033.1)
chlo 7,  cyto 3  (predict for NP_193157.1)
Subcellular
localization
TargetP
chlo 3  (predict for NP_001319934.1)
chlo 3  (predict for NP_001329033.1)
chlo 3  (predict for NP_193157.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00906 Carotenoid biosynthesis 2
Genes directly connected with PDS3 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
11.7 AT5G08650 Small GTP-binding protein [detail] 830766
10.1 PREP1 presequence protease 1 [detail] 821451
9.4 VAR2 FtsH extracellular protease family [detail] 817646
8.5 ZDS zeta-carotene desaturase [detail] 819647
7.7 APG2 Sec-independent periplasmic protein translocase [detail] 814640
Coexpressed
gene list		 [Coexpressed gene list for PDS3]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245284_at
245284_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245284_at
245284_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
245284_at
245284_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 827061      
Refseq ID (protein) NP_001319934.1 
NP_001329033.1 
NP_193157.1 


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