cis; AAGCGCG

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of AAGCGCG

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of AAGCGCG.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.42At3g62420bZIP transcription factor family protein bZIP
0.41At4g36730G-box binding factor 1 (GBF1) ((GBF1)) bZIP

link to other 304 cis elements in ATTED

similar seq.
←AAGCGCG→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; CGCGCTT
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
AAGCGCG1.000.0773
ACGCGCT0.850.09111
ACCGCGT0.790.1098
CCGCGTT0.790.1017
CGCGTTT0.760.1193
CGCGGTT0.740.0716
CGACGCG0.740.06101
AACCGCG0.740.0985
ACGCGGT0.740.09141
ACGCGTA0.730.1074