cis; ACGCGTA

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of ACGCGTA

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of ACGCGTA.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.76At5g49520WRKY family transcription factor ((WRKY48)) WRKY
0.74At5g24590turnip crinkle virus-interacting protein / TCV-interacting protein (TIP) ((TIP)) NAC
0.74At3g49530no apical meristem (NAM) family protein NAC
0.72At3g15210ethylene-responsive element-binding factor 4 (ERF4) ((ATERF4, RAP2.5)) AP2-EREBP
0.72At1g28370ERF domain protein 11 (ERF11) AP2-EREBP
0.72At1g80840WRKY family transcription factor ((WRKY40)) WRKY
0.72At3g52800zinc finger (AN1-like) family protein C2H2
0.70At4g17230scarecrow-like transcription factor 13 (SCL13) GRAS
0.70At5g66070zinc finger (C3HC4-type RING finger) family protein C3H
0.68At3g23250myb family transcription factor (MYB15) MYB
0.68At1g27730zinc finger (C2H2 type) family protein (ZAT10) / salt-tolerance zinc finger protein (STZ) ((ZAT10)) C2H2
0.67At4g31800WRKY family transcription factor ((WRKY18)) WRKY
0.66At5g59820zinc finger (C2H2 type) family protein (ZAT12) ((RHL41)) C2H2
0.66At5g04340zinc finger (C2H2 type) family protein ((C2H2)) C2H2
0.65At3g50260AP2 domain-containing transcription factor, putative AP2-EREBP

link to other 304 cis elements in ATTED

similar seq.
←ACGCGTA→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; TACGCGT
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
ACGCGTA1.000.1074
AACGCGT0.940.10127
CGCGTAA0.920.07199
CCGCGTT0.910.1017
ACGCGTT0.910.1096
CGCGTTT0.900.1193
GACGCGT0.890.0622
ACGCGGT0.890.09141
ACGCGTC0.890.0790
CGCGTCA0.890.07193