cis; CGCGTAA

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of CGCGTAA

[Help]
GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of CGCGTAA.

[Help]
correlTFfunction ((alias))*TF family
(link to AGRIS)
0.74At5g49520WRKY family transcription factor ((WRKY48)) WRKY
0.70At3g49530no apical meristem (NAM) family protein NAC
0.70At3g15210ethylene-responsive element-binding factor 4 (ERF4) ((ATERF4, RAP2.5)) AP2-EREBP
0.68At5g24590turnip crinkle virus-interacting protein / TCV-interacting protein (TIP) ((TIP)) NAC
0.68At5g66070zinc finger (C3HC4-type RING finger) family protein C3H
0.67At5g59820zinc finger (C2H2 type) family protein (ZAT12) ((RHL41)) C2H2
0.67At1g27730zinc finger (C2H2 type) family protein (ZAT10) / salt-tolerance zinc finger protein (STZ) ((ZAT10)) C2H2
0.67At3g52800zinc finger (AN1-like) family protein C2H2
0.67At1g80840WRKY family transcription factor ((WRKY40)) WRKY
0.67At1g28370ERF domain protein 11 (ERF11) AP2-EREBP
0.66At5g04340zinc finger (C2H2 type) family protein ((C2H2)) C2H2
0.66At4g17230scarecrow-like transcription factor 13 (SCL13) GRAS
0.65At3g23250myb family transcription factor (MYB15) MYB
0.62At3g50260AP2 domain-containing transcription factor, putative AP2-EREBP
0.61At3g19580zinc finger (C2H2 type) protein 2 (AZF2) ((AZF2)) C2H2

link to other 304 cis elements in ATTED

similar seq.
←CGCGTAA→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; TTACGCG
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
CGCGTAA1.000.07199
ACGCGTA0.920.1074
AACGCGT0.880.10127
CCGCGTA0.870.07200
CGCGTCA0.870.07193
ACGCGGT0.860.09141
TAACGCG0.860.0762
ACGCGTT0.850.1096
CCGCGTT0.850.1017
ACGCGTC0.840.0790