cis; AACGCGT

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
AACGCGTGTC CE3OSOSEM [ref] [ref]

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of AACGCGT

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of AACGCGT.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.78At3g52800zinc finger (AN1-like) family protein C2H2
0.77At1g80840WRKY family transcription factor ((WRKY40)) WRKY
0.77At5g49520WRKY family transcription factor ((WRKY48)) WRKY
0.76At1g28370ERF domain protein 11 (ERF11) AP2-EREBP
0.75At3g49530no apical meristem (NAM) family protein NAC
0.73At5g24590turnip crinkle virus-interacting protein / TCV-interacting protein (TIP) ((TIP)) NAC
0.73At4g31800WRKY family transcription factor ((WRKY18)) WRKY
0.72At2g38470WRKY family transcription factor ((WRKY33)) WRKY
0.72At1g22510zinc finger (C3HC4-type RING finger) family protein C3H
0.72At4g17230scarecrow-like transcription factor 13 (SCL13) GRAS
0.72At1g27730zinc finger (C2H2 type) family protein (ZAT10) / salt-tolerance zinc finger protein (STZ) ((ZAT10)) C2H2
0.71At3g15210ethylene-responsive element-binding factor 4 (ERF4) ((ATERF4, RAP2.5)) AP2-EREBP
0.71At5g66070zinc finger (C3HC4-type RING finger) family protein C3H
0.71At5g67300myb family transcription factor MYB
0.69At2g23320WRKY family transcription factor ((WRKY15)) WRKY

link to other 304 cis elements in ATTED

similar seq.
←AACGCGT→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; ACGCGTT
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
AACGCGT1.000.10127
ACGCGTT0.950.1096
ACGCGTA0.940.1074
AAACGCG0.930.07149
CGCGTTT0.930.1193
ACGCGGT0.920.09141
CCGCGTT0.920.1017
AACCGCG0.910.0985
TAACGCG0.900.0762
ACCGCGT0.890.1098