cis; AACGCGC


Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference


CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of AACGCGC

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GO IDterm-Log(p)number of
{A; genes in a GO}
numver of
{B; genes with this heptamer}
{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of AACGCGC.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.56At4g32800AP2 domain-containing transcription factor TINY, putative AP2-EREBP
0.52At3g20310ethylene-responsive element-binding family protein ((ATERF7)) AP2-EREBP
0.51At3g54810zinc finger (GATA type) family protein C2C2-Gata
0.51At2g45680TCP family transcription factor, putative TCP
0.50At1g22810AP2 domain-containing transcription factor, putative AP2-EREBP
0.49At1g21910AP2 domain-containing transcription factor family protein AP2-EREBP
0.48At3g50060myb family transcription factor MYB
-0.48At2g31510IBR domain-containing protein / ARIADNE-like protein ARI7 (ARI7) C3H
0.48At3g52800zinc finger (AN1-like) family protein C2H2
0.47At5g60820zinc finger (C3HC4-type RING finger) family protein C3H
0.46At4g34410AP2 domain-containing transcription factor, putative AP2-EREBP
-0.46At2g21240expressed protein BBR%2FBPC
0.46At5g67300myb family transcription factor MYB
0.46At5g49520WRKY family transcription factor ((WRKY48)) WRKY
0.45At4g01250WRKY family transcription factor ((WRKY22)) WRKY

link to other 304 cis elements in ATTED

similar seq.
←AACGCGC→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; GCGCGTT
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
AACGCGC1.000.0696
AAACGCG0.890.07149
AACGCGT0.890.10127
TAACGCG0.880.0762
ACGCGTA0.880.1074
ACGCGGT0.870.09141
ACGCGTT0.860.1096
AACCGCG0.860.0985
CGCGTTT0.860.1193
CCGCGTT0.840.1017