cis; AAACGCG

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of AAACGCG

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of AAACGCG.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.73At5g49520WRKY family transcription factor ((WRKY48)) WRKY
0.70At1g28370ERF domain protein 11 (ERF11) AP2-EREBP
0.69At3g49530no apical meristem (NAM) family protein NAC
0.69At3g52800zinc finger (AN1-like) family protein C2H2
0.69At1g80840WRKY family transcription factor ((WRKY40)) WRKY
0.68At3g23250myb family transcription factor (MYB15) MYB
0.68At4g31800WRKY family transcription factor ((WRKY18)) WRKY
0.68At5g66070zinc finger (C3HC4-type RING finger) family protein C3H
0.67At5g24590turnip crinkle virus-interacting protein / TCV-interacting protein (TIP) ((TIP)) NAC
0.66At1g22510zinc finger (C3HC4-type RING finger) family protein C3H
0.65At4g01250WRKY family transcription factor ((WRKY22)) WRKY
0.64At2g38470WRKY family transcription factor ((WRKY33)) WRKY
0.64At2g44840ethylene-responsive element-binding protein, putative AP2-EREBP
0.64At5g67300myb family transcription factor MYB
0.64At4g17230scarecrow-like transcription factor 13 (SCL13) GRAS

link to other 304 cis elements in ATTED

similar seq.
←AAACGCG→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; CGCGTTT
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
AAACGCG1.000.07149
AACGCGT0.930.10127
ACGCGTT0.920.1096
AACCGCG0.910.0985
CGCGTTT0.900.1193
AACGCGC0.890.0696
ACGCGGT0.880.09141
AGCTGTT0.870.07127
ACCGCGT0.870.1098
CCTTCCT0.860.0648