cis; ACCCGCG

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of ACCCGCG

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of ACCCGCG.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.46At2g38470WRKY family transcription factor ((WRKY33)) WRKY
0.43At1g80840WRKY family transcription factor ((WRKY40)) WRKY
0.42At4g23810WRKY family transcription factor ((WRKY29, WRKY53)) WRKY
0.42At4g31800WRKY family transcription factor ((WRKY18)) WRKY
0.40At3g54810zinc finger (GATA type) family protein C2C2-Gata

link to other 304 cis elements in ATTED

similar seq.
←ACCCGCG→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; CGCGGGT
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
ACCCGCG1.000.089
CCCGCGG0.910.0814
CCCTGGC0.770.09153