cis; ACCGACT

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
ACCGAC  DRE2COREZMRAB17 [ref] [ref] [ref]
RCCGAC  DRECRTCOREAT [ref] [ref] [ref] [ref] [ref]
 CCGAC  LTRECOREATCOR15 [ref] [ref] [ref] [ref]

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of ACCGACT

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of ACCGACT.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.43At3g07650zinc finger (B-box type) family protein C2C2-CO-like
0.41At2g40350AP2 domain-containing transcription factor, putative (DREB2) AP2-EREBP
0.41At5g48250zinc finger (B-box type) family protein C2C2-CO-like

link to other 304 cis elements in ATTED

similar seq.
←ACCGACT→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; AGTCGGT
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
ACCGACT1.000.0743
AACCGAC0.820.0726
CCGACCT0.700.0786
CACGCGT0.680.0774
CCACCTG0.680.08134
GTCGGTA0.670.06189
GTCGGTT0.660.0695
CACGCGG0.650.0740
GCCGACC0.650.0781
TACGTGT0.640.0698