Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference

CEG profile for exprimental conditions

Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of CAACCTC

GO IDterm-Log(p)number of
{A; genes in a GO}
numver of
{B; genes with this heptamer}
{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of CAACCTC.

correlTFfunction ((alias))*TF family
(link to AGRIS)
-0.50At4g17570zinc finger (GATA type) family protein C2C2-Gata
-0.49At2g31510IBR domain-containing protein / ARIADNE-like protein ARI7 (ARI7) C3H
-0.48At1g43850SEUSS transcriptional co-regulator ((SEU)) C2H2
-0.48At1g65040zinc finger (C3HC4-type RING finger) family protein C3H
-0.48At1g29950expressed protein BHLH
0.48At1g21910AP2 domain-containing transcription factor family protein AP2-EREBP
-0.48At1g22070bZIP family transcription factor (TGA3) ((TGA3)) bZIP
0.46At5g01380expressed protein Trihelix
-0.46At4g24470zinc finger (GATA type) protein ZIM (ZIM) ((ZIM)) C2C2-Gata
-0.45At1g03040basic helix-loop-helix (bHLH) family protein BHLH
-0.44At4g35580no apical meristem (NAM) family protein NAC
-0.44At1g04990zinc finger (CCCH-type) family protein C2H2
-0.44At1g77920bZIP family transcription factor bZIP
-0.44At1g80400zinc finger (C3HC4-type RING finger) family protein C3H
-0.44At4g16430basic helix-loop-helix (bHLH) family protein BHLH

link to other 304 cis elements in ATTED

similar seq.

complimentary; GAGGTTG
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position