cis; CACTATA

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
YACT    CACTFTPPCA1 [ref]

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of CACTATA

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of CACTATA.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.46At1g43160AP2 domain-containing protein RAP2.6 (RAP2.6) AP2-EREBP

link to other 304 cis elements in ATTED

similar seq.
←CACTATA→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; TATAGTG
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
CACTATA1.000.074
TATATAA0.820.111
CTATATA0.800.144
ATATAAA0.790.092
TAAATAC0.770.0636
TATAAAT0.760.1018
CTATAAA0.760.1063
TATATAT0.750.1026
ATATATA0.750.1026
CTCTATA0.740.107