cis; CCCTAAT

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of CCCTAAT

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of CCCTAAT.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.63At4g3093050S ribosomal protein L21, mitochondrial (RPL21M) ((WRKY32)) WRKY
0.62At3g57150dyskerin, putative / nucleolar protein NAP57, putative ((NAP57)) NAC
0.59At1g27050homeobox-leucine zipper family protein Homeobox
0.58At1g71260expressed protein WHIRLY
-0.56At3g02340zinc finger (C3HC4-type RING finger) family protein C3H
0.53At2g02740transcription factor, putative WHIRLY
0.53At1g14410DNA-binding protein-related WHIRLY
0.53At1g72050zinc finger (C2H2 type) family protein C2H2
0.52At3g16870zinc finger (GATA type) family protein C2C2-Gata
0.51At5g16070chaperonin, putative TCP
0.49At2g36010E2F transcription factor-3 (E2F3) ((E2F3)) E2F-DP
-0.48At1g50440zinc finger (C3HC4-type RING finger) family protein C3H
-0.48At5g38895zinc finger (C3HC4-type RING finger) family protein C3H
-0.48At1g08320bZIP family transcription factor bZIP
-0.47At2g18280tubby-like protein 2 (TULP2) TUB

link to other 304 cis elements in ATTED

similar seq.
←CCCTAAT→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; ATTAGGG
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
CCCTAAT1.000.0715
ACCCTAA0.970.1129
AACCCTA0.970.1320
AAACCCT0.970.1420
ACCCTAG0.960.0920
TAGGGTT0.960.0933
CTAGGGT0.950.0744
AGGGTTT0.950.1033
TTAGGGT0.940.0739
GGGTTTT0.940.0819