cis; GCCGCGG

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of GCCGCGG

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of GCCGCGG.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.43At1g64380AP2 domain-containing transcription factor, putative AP2-EREBP
0.42At2g44840ethylene-responsive element-binding protein, putative AP2-EREBP

link to other 304 cis elements in ATTED

similar seq.
←GCCGCGG→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; CCGCGGC
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
GCCGCGG1.000.09175
AACGCGT0.710.10127
ACGCGTT0.710.1096
CGCGTTC0.710.06177
TAACGCG0.710.0762
CCGCGTA0.700.07200
CCGCGTT0.700.1017
CGCGTTT0.700.1193
AACCGCG0.690.0985
ACGCGGT0.690.09141