cis; GCCACGG

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
GCCAC   SORLIP1AT [ref] [ref]

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of GCCACGG

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of GCCACGG.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.45At5g22480zinc finger (ZPR1-type) family protein C2H2

link to other 304 cis elements in ATTED

similar seq.
←GCCACGG→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; CCGTGGC
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
GCCACGG1.000.06150
TCTAGAA0.800.1580
GCGAAGG0.790.0979
ACTCCTG0.790.0656
CTCCAGA0.790.0754
CTCTAGA0.780.1083
CCCTGGG0.780.06113
TCCAGAA0.770.07104
GCTGTAC0.770.0717
CTTCTAG0.760.1090