cis; GCTGTAC

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
   GTAC CURECORECR [ref] [ref] [ref] [ref]

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of GCTGTAC

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of GCTGTAC.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
-0.43At2g37580zinc finger (C3HC4-type RING finger) family protein C3H
0.43At3g02380zinc finger protein CONSTANS-LIKE 2 (COL2) ((CO, COL2)) C2C2-CO-like
-0.43At5g14960transcription factor, putative / E2F-like repressor E2L1 (E2L1) E2F-DP
0.41At1g76890trihelix DNA-binding protein / GT-2 factor (GT2) ((GT2)) Trihelix
0.41At1g73830basic helix-loop-helix (bHLH) family protein BHLH
0.41At3g58120bZIP transcription factor family protein bZIP

link to other 304 cis elements in ATTED

similar seq.
←GCTGTAC→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; GTACAGC
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
GCTGTAC1.000.0717
TCTAGAA0.830.1580
GCGAAGG0.820.0979
CTCCAGA0.810.0754
CCCTGGG0.800.06113
TTCTAGA0.800.1188
CTTCTAG0.790.1090
CTCTAGA0.780.1083
GCCACGG0.770.06150
ACTCCTG0.770.0656