cis; CTCCAGA

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of CTCCAGA

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of CTCCAGA.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.57At2g26150heat shock transcription factor family protein ((ATHSFA2)) HSF
0.51At5g05410DRE-binding protein (DREB2A) ((DREB2A)) AP2-EREBP
0.51At3g63350heat shock transcription factor family protein ((AT-HSFA7B)) HSF
0.49At2g40350AP2 domain-containing transcription factor, putative (DREB2) AP2-EREBP
0.49At4g11660heat shock factor protein 7 (HSF7) / heat shock transcription factor 7 (HSTF7) ((AT-HSFB2B)) HSF
0.47At5g04410no apical meristem (NAM) family protein ((NAC2)) NAC
0.46At5g22480zinc finger (ZPR1-type) family protein C2H2
0.43At2g47520AP2 domain-containing transcription factor, putative AP2-EREBP
0.42At1g14200zinc finger (C3HC4-type RING finger) family protein C3H
0.41At1g26800zinc finger (C3HC4-type RING finger) family protein C3H

link to other 304 cis elements in ATTED

similar seq.
←CTCCAGA→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; TCTGGAG
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
CTCCAGA1.000.0754
TTCTAGA0.860.1188
TCTAGAA0.860.1580
CTCTAGA0.840.1083
CCCTGGG0.830.06113
CTTCTAG0.830.1090
TCTGGAA0.830.0720
GCTGTAC0.810.0717
ACTCCTG0.790.0656
GCCACGG0.790.06150