cis; TTGACTT

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
TGTGACATTGAAATTCTTTGACTTTA YREGIONNTPRB1B [ref]
                 TTGAC     WBOXATNPR1 [ref] [ref]
                  TGACT    WBOXHVISO1 [ref]
                  TGACY    WBOXNTERF3 [ref]
                  TGAC     WRKY71OS [ref] [ref]

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of TTGACTT

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of TTGACTT.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.72At2g23320WRKY family transcription factor ((WRKY15)) WRKY
0.72At4g18880heat shock transcription factor 21 (HSF21) ((AT-HSFA4A)) HSF
0.71At2g30250WRKY family transcription factor ((WRKY25)) WRKY
0.70At1g18570myb family transcription factor (MYB51) ((MYB51)) MYB
0.69At2g38470WRKY family transcription factor ((WRKY33)) WRKY
0.68At1g62300WRKY family transcription factor ((WRKY6)) WRKY
0.67At2g42360zinc finger (C3HC4-type RING finger) family protein C3H
0.66At1g42990bZIP transcription factor family protein bZIP
0.62At3g16720zinc finger (C3HC4-type RING finger) family protein ((ATL2)) C3H
0.62At4g23810WRKY family transcription factor ((WRKY29, WRKY53)) WRKY
0.62At5g63790no apical meristem (NAM) family protein NAC
0.61At5g07100WRKY family transcription factor ((WRKY26)) WRKY
0.60At3g10500no apical meristem (NAM) family protein NAC
0.60At5g24110WRKY family transcription factor ((WRKY30)) WRKY
0.58At5g66070zinc finger (C3HC4-type RING finger) family protein C3H

link to other 304 cis elements in ATTED

similar seq.
←TTGACTT→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; AAGTCAA
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
TTGACTT1.000.0983
TGACTTT0.960.0875
AAGTCAA0.920.08125
AGTCAAC0.920.0780
TTTGACT0.900.0897
GTTGACT0.900.0691
ACTTTGA0.900.0692
GACTTTT0.880.08142
TTGACCA0.850.06103
AAAGTCA0.840.08184