cis; AAGTCAA

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of AAGTCAA

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of AAGTCAA.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.66At4g18880heat shock transcription factor 21 (HSF21) ((AT-HSFA4A)) HSF
0.64At1g67970heat shock factor protein, putative (HSF5) / heat shock transcription factor, putative (HSTF5) ((AT-HSFA8)) HSF
0.63At1g22070bZIP family transcription factor (TGA3) ((TGA3)) bZIP
0.61At1g18570myb family transcription factor (MYB51) ((MYB51)) MYB
0.58At2g30250WRKY family transcription factor ((WRKY25)) WRKY
0.58At3g10500no apical meristem (NAM) family protein NAC
0.58At1g62300WRKY family transcription factor ((WRKY6)) WRKY
-0.55At2g45190axial regulator YABBY1 (YABBY1) / abnormal floral organs protein (AFO) / filamentous flower protein (FIL) ((AFO, FIL, YAB1)) C2C2-YABBY
0.53At3g16720zinc finger (C3HC4-type RING finger) family protein ((ATL2)) C3H
0.53At1g42990bZIP transcription factor family protein bZIP
0.51At4g01720WRKY family transcription factor ((WRKY47)) WRKY
0.51At1g77920bZIP family transcription factor bZIP
0.50At2g43000no apical meristem (NAM) family protein NAC
0.50At4g23810WRKY family transcription factor ((WRKY29, WRKY53)) WRKY
0.50At1g06160ethylene-responsive factor, putative AP2-EREBP

link to other 304 cis elements in ATTED

similar seq.
←AAGTCAA→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; TTGACTT
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
AAGTCAA1.000.08125
AGTCAAC0.920.0780
TTGACTT0.920.0983
TGACTTT0.920.0875
AAAGTCA0.910.08184
TTGACCA0.890.06103
AAAAGTC0.890.08170
GACTTTT0.880.08142
GTTGACT0.880.0691
TTTGACT0.860.0897