cis; AAAGTCA

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
AAAG    DOFCOREZM [ref] [ref]

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of AAAGTCA

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of AAAGTCA.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.71At2g23320WRKY family transcription factor ((WRKY15)) WRKY
0.69At2g38470WRKY family transcription factor ((WRKY33)) WRKY
0.66At1g80840WRKY family transcription factor ((WRKY40)) WRKY
0.65At5g49520WRKY family transcription factor ((WRKY48)) WRKY
0.65At2g42360zinc finger (C3HC4-type RING finger) family protein C3H
0.65At3g23250myb family transcription factor (MYB15) MYB
0.64At4g17500ethylene-responsive element-binding protein 1 (ERF1) / EREBP-2 protein ((ATERF-1)) AP2-EREBP
0.62At3g49530no apical meristem (NAM) family protein NAC
0.62At1g18570myb family transcription factor (MYB51) ((MYB51)) MYB
0.62At1g42990bZIP transcription factor family protein bZIP
0.61At4g31800WRKY family transcription factor ((WRKY18)) WRKY
0.61At4g01250WRKY family transcription factor ((WRKY22)) WRKY
0.60At1g62300WRKY family transcription factor ((WRKY6)) WRKY
0.60At5g66070zinc finger (C3HC4-type RING finger) family protein C3H
0.60At4g23810WRKY family transcription factor ((WRKY29, WRKY53)) WRKY

link to other 304 cis elements in ATTED

similar seq.
←AAAGTCA→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; TGACTTT
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
AAAGTCA1.000.08184
AAGTCAA0.910.08125
AAAAGTC0.910.08170
TGACTTT0.840.0875
TTGACTT0.840.0983
TTGACCA0.830.06103
AGTCAAC0.820.0780
TAACGCG0.810.0762
TTTGACT0.810.0897
ACCTTCC0.780.0679