ATTED-II : GeneID search result

[←][→] vvi VIT_00014569001 Gene

functional annotation

Function

(-)-germacrene D synthase

GO BP

GO CC

GO MF

KEGG

vvi00909 [list] [network] Sesquiterpenoid and triterpenoid biosynthesis (55 genes)

Protein

NP_001268213.1 XP_019072406.1

BLAST

NP_001268213.1 XP_019072406.1

Orthologous

[Ortholog page] LOC542156 (zma) LOC542688 (zma) LOC542689 (zma) LOC542754 (zma) SSTLE1 (sly) LOC732751 (zma) LOC732795 (zma) LOC732834 (zma) AT2G23230 (ath) AT3G14490 (ath) AT3G14520 (ath) AT3G14540 (ath) AT3G29110 (ath) AT3G29190 (ath) AT3G29410 (ath) AT3G32030 (ath) TPS12 (ath) TPS13 (ath) TS1 (ath) AT4G20200 (ath) AT4G20210 (ath) AT4G20230 (ath) TPS21 (ath) AT5G48110 (ath) AT1G31950 (ath) AT1G33750 (ath) AT1G48800 (ath) AT1G48820 (ath) AT1G66020 (ath) AT1G70080 (ath) LOC4326845 (osa) LOC4332831 (osa) LOC4332889 (osa) LOC4332893 (osa) LOC4332895 (osa) LOC4333167 (osa) LOC4335518 (osa) LOC4335522 (osa) LOC4335526 (osa) LOC4335529 (osa) LOC4344635 (osa) LOC4344755 (osa) LOC7454979 (ppo) LOC7457170 (ppo) LOC7457783 (ppo) LOC9267045 (osa) LOC9267316 (osa) LOC9270657 (osa) LOC9272299 (osa) LOC11405529 (mtr) LOC11407907 (mtr) LOC11411115 (mtr) LOC11416693 (mtr) LOC11421083 (mtr) LOC11426332 (mtr) LOC11432484 (mtr) LOC25490897 (mtr) LOC25491517 (mtr) LOC25492138 (mtr) LOC25492939 (mtr) LOC25496253 (mtr) LOC25500131 (mtr) LOC100125649 (zma) VALCS (vvi) LOC100241381 (vvi) LOC100241480 (vvi) LOC100241877 (vvi) LOC100243606 (vvi) LOC100246608 (vvi) LOC100249970 (vvi) LOC100252140 (vvi) LOC100255553 (vvi) LOC100256880 (vvi) LOC100257265 (vvi) LOC100258596 (vvi) LOC100260112 (vvi) GERA (vvi) LOC100260629 (vvi) LOC100260714 (vvi) LOC100261959 (vvi) LOC100261963 (vvi) LOC100263746 (vvi) LOC100264159 (vvi) LOC100265509 (vvi) LOC100267137 (vvi) LOC100267145 (vvi) LOC100267551 (vvi) LOC100273678 (zma) LOC100281754 (zma) TPS19 (gma) TPS16 (gma) TPS10 (gma) TPS11 (gma) LOC100802427 (gma) TPS13 (gma) TPS31 (sly) TPS17 (sly) TPS16 (sly) LOC101245838 (sly) TPS14 (sly) TPS36 (sly) LOC101257190 (sly) LOC101258081 (sly) TPS28 (sly) TPS32 (sly) TPS33 (sly) TPS35 (sly) LOC103629258 (zma) LOC103641097 (zma) LOC103641099 (zma) LOC103641105 (zma) LOC103641187 (zma) LOC103641226 (zma) LOC103646867 (zma) LOC103834122 (bra) LOC103834164 (bra) LOC103838683 (bra) LOC103839120 (bra) LOC103841971 (bra) LOC103841981 (bra) LOC103842000 (bra) LOC103844604 (bra) LOC103845195 (bra) LOC103848456 (bra) LOC103849526 (bra) LOC103849591 (bra) LOC103859578 (bra) LOC103859580 (bra) LOC103860598 (bra) LOC103861083 (bra) LOC103861084 (bra) LOC103862704 (bra) LOC103863851 (bra) LOC103864213 (bra) LOC103874257 (bra) LOC103874801 (bra) TPS12 (sly) LOC104648119 (sly) LOC107275762 (osa) LOC107276422 (osa) LOC107276496 (osa) LOC107277636 (osa) LOC107277734 (osa) LOC107278021 (osa) LOC107278125 (osa) LOC107278693 (osa) LOC107280712 (osa) LOC107280931 (osa) LOC107280950 (osa) LOC108870167 (bra) LOC109941320 (zma) LOC109943031 (zma) LOC109943306 (zma)

Subcellular
localization
wolf

chlo 6, cyto 2, E.R. 1, pero 1	(predict for NP_001268213.1)
chlo 9, E.R. 1, pero 1	(predict for XP_019072406.1)

Subcellular
localization
TargetP

chlo 3, other 3	(predict for NP_001268213.1)
chlo 3	(predict for XP_019072406.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00909	Sesquiterpenoid and triterpenoid biosynthesis	3

Genes directly connected with LOC100232954 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
5.7	LOC100257265	(E)-beta-caryophyllene synthase	[detail]	100257265
4.5	LOC100266675	methanol O-anthraniloyltransferase	[detail]	100266675
3.9	LOC100247714	transcription factor bHLH92	[detail]	100247714

Coexpressed
gene list

[Coexpressed gene list for LOC100232954]

Gene expression

All samples

[Expression pattern for all samples]

Link to other DBs
Entrez Gene ID	100232954
Refseq ID (protein)	NP_001268213.1
Refseq ID (protein)	XP_019072406.1

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