ATTED-II : GeneID search result

[←][→] ath AT4G13280 Gene

functional annotation

Function

terpenoid synthase 12

GO BP

GO:0045338 [list] [network] farnesyl diphosphate metabolic process	(20 genes)	IDA
GO:0051762 [list] [network] sesquiterpene biosynthetic process	(25 genes)	IBA
GO:0016106 [list] [network] sesquiterpenoid biosynthetic process	(26 genes)	IDA
GO:0009611 [list] [network] response to wounding	(212 genes)	IEP

GO CC

GO:0005777 [list] [network] peroxisome	(325 genes)	IDA
GO:0009507 [list] [network] chloroplast	(5095 genes)	ISM

GO MF

GO:0052683 [list] [network] (Z)-gamma-bisabolene synthase activity	(2 genes)	IEA
GO:0010333 [list] [network] terpene synthase activity	(32 genes)	IEA
GO:0009975 [list] [network] cyclase activity	(42 genes)	IBA IDA
GO:0000287 [list] [network] magnesium ion binding	(115 genes)	IEA

KEGG

ath00909 [list] [network] Sesquiterpenoid and triterpenoid biosynthesis (23 genes)

Protein

NP_001328007.1 NP_193064.2

BLAST

NP_001328007.1 NP_193064.2

Orthologous

[Ortholog page] LOC542156 (zma) LOC542688 (zma) LOC542689 (zma) LOC542754 (zma) SSTLE1 (sly) LOC732751 (zma) LOC732795 (zma) LOC732834 (zma) AT2G23230 (ath) AT3G14490 (ath) AT3G14520 (ath) AT3G14540 (ath) AT3G29110 (ath) AT3G29190 (ath) AT3G29410 (ath) AT3G32030 (ath) TPS13 (ath) TS1 (ath) AT4G20200 (ath) AT4G20210 (ath) AT4G20230 (ath) TPS21 (ath) AT5G48110 (ath) AT1G31950 (ath) AT1G33750 (ath) AT1G48800 (ath) AT1G48820 (ath) AT1G66020 (ath) AT1G70080 (ath) LOC4326845 (osa) LOC4332831 (osa) LOC4332889 (osa) LOC4332893 (osa) LOC4332895 (osa) LOC4333167 (osa) LOC4335518 (osa) LOC4335522 (osa) LOC4335526 (osa) LOC4335529 (osa) LOC4344635 (osa) LOC4344755 (osa) LOC7454979 (ppo) LOC7457170 (ppo) LOC7457783 (ppo) LOC9267045 (osa) LOC9267316 (osa) LOC9270657 (osa) LOC9272299 (osa) LOC11405529 (mtr) LOC11407907 (mtr) LOC11411115 (mtr) LOC11416693 (mtr) LOC11421083 (mtr) LOC11426332 (mtr) LOC11432484 (mtr) LOC25490897 (mtr) LOC25491517 (mtr) LOC25492138 (mtr) LOC25492939 (mtr) LOC25496253 (mtr) LOC25500131 (mtr) LOC100125649 (zma) LOC100232954 (vvi) VALCS (vvi) LOC100241381 (vvi) LOC100241480 (vvi) LOC100241877 (vvi) LOC100243606 (vvi) LOC100246608 (vvi) LOC100249970 (vvi) LOC100252140 (vvi) LOC100255553 (vvi) LOC100256880 (vvi) LOC100257265 (vvi) LOC100258596 (vvi) LOC100260112 (vvi) GERA (vvi) LOC100260629 (vvi) LOC100260714 (vvi) LOC100261959 (vvi) LOC100261963 (vvi) LOC100263746 (vvi) LOC100264159 (vvi) LOC100265509 (vvi) LOC100267137 (vvi) LOC100267145 (vvi) LOC100267551 (vvi) LOC100273678 (zma) LOC100281754 (zma) TPS19 (gma) TPS16 (gma) TPS10 (gma) TPS11 (gma) LOC100802427 (gma) TPS13 (gma) TPS31 (sly) TPS17 (sly) TPS16 (sly) LOC101245838 (sly) TPS14 (sly) TPS36 (sly) LOC101257190 (sly) LOC101258081 (sly) TPS28 (sly) TPS32 (sly) TPS33 (sly) TPS35 (sly) LOC103629258 (zma) LOC103641097 (zma) LOC103641099 (zma) LOC103641105 (zma) LOC103641187 (zma) LOC103641226 (zma) LOC103646867 (zma) LOC103834122 (bra) LOC103834164 (bra) LOC103838683 (bra) LOC103839120 (bra) LOC103841971 (bra) LOC103841981 (bra) LOC103842000 (bra) LOC103844604 (bra) LOC103845195 (bra) LOC103848456 (bra) LOC103849526 (bra) LOC103849591 (bra) LOC103859578 (bra) LOC103859580 (bra) LOC103860598 (bra) LOC103861083 (bra) LOC103861084 (bra) LOC103862704 (bra) LOC103863851 (bra) LOC103864213 (bra) LOC103874257 (bra) LOC103874801 (bra) TPS12 (sly) LOC104648119 (sly) LOC107275762 (osa) LOC107276422 (osa) LOC107276496 (osa) LOC107277636 (osa) LOC107277734 (osa) LOC107278021 (osa) LOC107278125 (osa) LOC107278693 (osa) LOC107280712 (osa) LOC107280931 (osa) LOC107280950 (osa) LOC108870167 (bra) LOC109941320 (zma) LOC109943031 (zma) LOC109943306 (zma)

Subcellular
localization
wolf

chlo 2, nucl 1, cyto 1, plas 1, chlo_mito 1, cysk_nucl 1, cyto_plas 1	(predict for NP_001328007.1)
chlo 2, nucl 1, cyto 1, plas 1, chlo_mito 1, cysk_nucl 1, cyto_plas 1	(predict for NP_193064.2)

Subcellular
localization
TargetP

other 7	(predict for NP_001328007.1)
other 7	(predict for NP_193064.2)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with TPS12 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
12.4	CYP71A19	cytochrome P450, family 71, subfamily A, polypeptide 19	[detail]	826959
8.5	AT4G14060	Polyketide cyclase/dehydrase and lipid transport superfamily protein	[detail]	827042
6.6	AT5G37990	S-adenosyl-L-methionine-dependent methyltransferase superfamily protein	[detail]	833778

Coexpressed
gene list

[Coexpressed gene list for TPS12]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

254766_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

254766_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

254766_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	826958
Refseq ID (protein)	NP_001328007.1
Refseq ID (protein)	NP_193064.2

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