ATTED-II : GeneID search result

[←][→] ppo POPTR_011G142800v3 Gene

functional annotation

Function

(-)-germacrene D synthase

GO BP

GO CC

GO MF

KEGG

pop00909 [list] [network] Sesquiterpenoid and triterpenoid biosynthesis (8 genes)

Protein

XP_002317018.3 XP_024436788.1

BLAST

XP_002317018.3 XP_024436788.1

Orthologous

[Ortholog page] LOC542156 (zma) LOC542688 (zma) LOC542689 (zma) LOC542754 (zma) SSTLE1 (sly) LOC732751 (zma) LOC732795 (zma) LOC732834 (zma) AT2G23230 (ath) AT3G14490 (ath) AT3G14520 (ath) AT3G14540 (ath) AT3G29110 (ath) AT3G29190 (ath) AT3G29410 (ath) AT3G32030 (ath) TPS12 (ath) TPS13 (ath) TS1 (ath) AT4G20200 (ath) AT4G20210 (ath) AT4G20230 (ath) TPS21 (ath) AT5G48110 (ath) AT1G31950 (ath) AT1G33750 (ath) AT1G48800 (ath) AT1G48820 (ath) AT1G66020 (ath) AT1G70080 (ath) LOC4326845 (osa) LOC4332831 (osa) LOC4332889 (osa) LOC4332893 (osa) LOC4332895 (osa) LOC4333167 (osa) LOC4335518 (osa) LOC4335522 (osa) LOC4335526 (osa) LOC4335529 (osa) LOC4344635 (osa) LOC4344755 (osa) LOC7457170 (ppo) LOC7457783 (ppo) LOC9267045 (osa) LOC9267316 (osa) LOC9270657 (osa) LOC9272299 (osa) LOC11405529 (mtr) LOC11407907 (mtr) LOC11411115 (mtr) LOC11416693 (mtr) LOC11421083 (mtr) LOC11426332 (mtr) LOC11432484 (mtr) LOC25490897 (mtr) LOC25491517 (mtr) LOC25492138 (mtr) LOC25492939 (mtr) LOC25496253 (mtr) LOC25500131 (mtr) LOC100125649 (zma) LOC100232954 (vvi) VALCS (vvi) LOC100241381 (vvi) LOC100241480 (vvi) LOC100241877 (vvi) LOC100243606 (vvi) LOC100246608 (vvi) LOC100249970 (vvi) LOC100252140 (vvi) LOC100255553 (vvi) LOC100256880 (vvi) LOC100257265 (vvi) LOC100258596 (vvi) LOC100260112 (vvi) GERA (vvi) LOC100260629 (vvi) LOC100260714 (vvi) LOC100261959 (vvi) LOC100261963 (vvi) LOC100263746 (vvi) LOC100264159 (vvi) LOC100265509 (vvi) LOC100267137 (vvi) LOC100267145 (vvi) LOC100267551 (vvi) LOC100273678 (zma) LOC100281754 (zma) TPS19 (gma) TPS16 (gma) TPS10 (gma) TPS11 (gma) LOC100802427 (gma) TPS13 (gma) TPS31 (sly) TPS17 (sly) TPS16 (sly) LOC101245838 (sly) TPS14 (sly) TPS36 (sly) LOC101257190 (sly) LOC101258081 (sly) TPS28 (sly) TPS32 (sly) TPS33 (sly) TPS35 (sly) LOC103629258 (zma) LOC103641097 (zma) LOC103641099 (zma) LOC103641105 (zma) LOC103641187 (zma) LOC103641226 (zma) LOC103646867 (zma) LOC103834122 (bra) LOC103834164 (bra) LOC103838683 (bra) LOC103839120 (bra) LOC103841971 (bra) LOC103841981 (bra) LOC103842000 (bra) LOC103844604 (bra) LOC103845195 (bra) LOC103848456 (bra) LOC103849526 (bra) LOC103849591 (bra) LOC103859578 (bra) LOC103859580 (bra) LOC103860598 (bra) LOC103861083 (bra) LOC103861084 (bra) LOC103862704 (bra) LOC103863851 (bra) LOC103864213 (bra) LOC103874257 (bra) LOC103874801 (bra) TPS12 (sly) LOC104648119 (sly) LOC107275762 (osa) LOC107276422 (osa) LOC107276496 (osa) LOC107277636 (osa) LOC107277734 (osa) LOC107278021 (osa) LOC107278125 (osa) LOC107278693 (osa) LOC107280712 (osa) LOC107280931 (osa) LOC107280950 (osa) LOC108870167 (bra) LOC109941320 (zma) LOC109943031 (zma) LOC109943306 (zma)

Subcellular
localization
wolf

chlo 5, mito 3, nucl 1, cyto_mito 1	(predict for XP_002317018.3)
chlo 6, mito 2, nucl 1, mito_plas 1	(predict for XP_024436788.1)

Subcellular
localization
TargetP

other 3, chlo 3	(predict for XP_002317018.3)
other 4, chlo 3	(predict for XP_024436788.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00052	Galactose metabolism	2

Genes directly connected with LOC7454979 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
3.9	LOC7468122	galactinol synthase 1	[detail]	7468122
3.2	LOC7474552	probable inorganic phosphate transporter 1-9	[detail]	7474552
3.0	LOC7471087	galactinol synthase 1	[detail]	7471087

Coexpressed
gene list

[Coexpressed gene list for LOC7454979]

Gene expression

All samples

[Expression pattern for all samples]

Link to other DBs
Entrez Gene ID	7454979
Refseq ID (protein)	XP_002317018.3
Refseq ID (protein)	XP_024436788.1

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