[←][→] vvi   VIT_00031470001 Gene
functional annotation
Function   DNA ligase 1  
GO BP
GO CC
GO MF
KEGG vvi03030 [list] [network] DNA replication (50 genes)
vvi03410 [list] [network] Base excision repair (40 genes)
vvi03420 [list] [network] Nucleotide excision repair (63 genes)
vvi03430 [list] [network] Mismatch repair (42 genes)
Protein XP_002272683.2 
BLAST XP_002272683.2 
Orthologous [Ortholog page] LIG1 (ath)  AT1G49250 (ath)  LOC4348965 (osa)  LOC7463320 (ppo)  LOC11410741 (mtr)  LOC25492370 (mtr)  LOC100383890 (zma)  LOC100783155 (gma)  LOC101262281 (sly)  LOC103843415 (bra)  LOC103871561 (bra) 
Subcellular
localization
wolf
chlo 9  (predict for XP_002272683.2)
Subcellular
localization
TargetP
mito 7,  chlo 5  (predict for XP_002272683.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03430 Mismatch repair 4
vvi03030 DNA replication 2
vvi03410 Base excision repair 2
vvi03420 Nucleotide excision repair 2
Genes directly connected with LOC100256907 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.2 MSH2 mismatch repair protein [detail] 100268052
5.9 LOC100246530 DNA polymerase delta catalytic subunit [detail] 100246530
5.5 LOC100258398 DNA repair protein RadA [detail] 100258398
5.4 LOC104882327 ubiquitin carboxyl-terminal hydrolase 21 [detail] 104882327
4.6 LOC100245057 transcription factor E2FB [detail] 100245057
4.5 LOC100249714 kinetochore protein ndc80 [detail] 100249714
3.5 LOC100266586 DUF724 domain-containing protein 6 [detail] 100266586
Coexpressed
gene list		 [Coexpressed gene list for LOC100256907]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 100256907      
Refseq ID (protein) XP_002272683.2 


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