[←][→] ath   AT1G49250 Gene
functional annotation
Function   ATP-dependent DNA ligase  
GO BP
GO:0006273 [list] [network] lagging strand elongation  (4 genes)  IBA  
GO:0006266 [list] [network] DNA ligation  (7 genes)  IBA  
GO:0006281 [list] [network] DNA repair  (295 genes)  IBA  
GO CC
GO:0005739 [list] [network] mitochondrion  (4405 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IBA  
GO MF
GO:0003910 [list] [network] DNA ligase (ATP) activity  (4 genes)  IBA  
KEGG ath03030 [list] [network] DNA replication (50 genes)
ath03410 [list] [network] Base excision repair (43 genes)
ath03420 [list] [network] Nucleotide excision repair (69 genes)
ath03430 [list] [network] Mismatch repair (39 genes)
Protein NP_175351.1 
BLAST NP_175351.1 
Orthologous [Ortholog page] LIG1 (ath)  LOC4348965 (osa)  LOC7463320 (ppo)  LOC11410741 (mtr)  LOC25492370 (mtr)  LOC100256907 (vvi)  LOC100383890 (zma)  LOC100783155 (gma)  LOC101262281 (sly)  LOC103843415 (bra)  LOC103871561 (bra) 
Subcellular
localization
wolf
nucl 4,  chlo 2,  plas 2,  cyto 1,  golg_plas 1  (predict for NP_175351.1)
Subcellular
localization
TargetP
other 7  (predict for NP_175351.1)
Gene coexpression
Network*for
coexpressed
genes
Coexpressed
gene list		 [Coexpressed gene list for AT1G49250]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262447_at
262447_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262447_at
262447_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
262447_at
262447_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841349      
Refseq ID (protein) NP_175351.1 


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