cis; AACGCGC


Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference


CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of AACGCGC

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GO IDterm-Log(p)number of
{A; genes in a GO}
numver of
{B; genes with this heptamer}
{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of AACGCGC.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.56At4g32800AP2 domain-containing transcription factor TINY, putative AP2-EREBP
0.52At3g20310ethylene-responsive element-binding family protein ((ATERF7)) AP2-EREBP
0.51At3g54810zinc finger (GATA type) family protein C2C2-Gata
0.51At2g45680TCP family transcription factor, putative TCP
0.50At1g22810AP2 domain-containing transcription factor, putative AP2-EREBP
0.49At1g21910AP2 domain-containing transcription factor family protein AP2-EREBP
0.48At3g50060myb family transcription factor MYB
-0.48At2g31510IBR domain-containing protein / ARIADNE-like protein ARI7 (ARI7) C3H
0.48At3g52800zinc finger (AN1-like) family protein C2H2
0.47At5g60820zinc finger (C3HC4-type RING finger) family protein C3H
0.46At4g34410AP2 domain-containing transcription factor, putative AP2-EREBP
-0.46At2g21240expressed protein BBR%2FBPC
0.46At5g67300myb family transcription factor MYB
0.46At5g49520WRKY family transcription factor ((WRKY48)) WRKY
0.45At4g01250WRKY family transcription factor ((WRKY22)) WRKY

link to other 304 cis elements in ATTED

similar seq.
AACGCGC
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; GCGCGTT
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
AACGCGC1.000.0696
AAACGCG0.890.07149
AACGCGT0.890.10127
TAACGCG0.880.0762
ACGCGTA0.880.1074
ACGCGGT0.870.09141
ACGCGTT0.860.1096
AACCGCG0.860.0985
CGCGTTT0.860.1193
CCGCGTT0.840.1017