cis; ACGCGCT

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of ACGCGCT

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of ACGCGCT.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.74At3g50060myb family transcription factor MYB
0.70At3g52800zinc finger (AN1-like) family protein C2H2
0.69At5g24590turnip crinkle virus-interacting protein / TCV-interacting protein (TIP) ((TIP)) NAC
0.69At5g67300myb family transcription factor MYB
0.68At3g15210ethylene-responsive element-binding factor 4 (ERF4) ((ATERF4, RAP2.5)) AP2-EREBP
0.68At1g28370ERF domain protein 11 (ERF11) AP2-EREBP
0.67At1g80840WRKY family transcription factor ((WRKY40)) WRKY
0.66At4g01250WRKY family transcription factor ((WRKY22)) WRKY
0.65At3g49530no apical meristem (NAM) family protein NAC
0.65At1g21910AP2 domain-containing transcription factor family protein AP2-EREBP
0.64At5g49520WRKY family transcription factor ((WRKY48)) WRKY
0.63At1g27730zinc finger (C2H2 type) family protein (ZAT10) / salt-tolerance zinc finger protein (STZ) ((ZAT10)) C2H2
0.62At4g17490ethylene-responsive element-binding protein, putative ((ATERF6, ERF-6-6)) AP2-EREBP
0.61At4g34410AP2 domain-containing transcription factor, putative AP2-EREBP
0.61At4g31800WRKY family transcription factor ((WRKY18)) WRKY

link to other 304 cis elements in ATTED

similar seq.
←ACGCGCT→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; AGCGCGT
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
ACGCGCT1.000.09111
ACCGCGT0.910.1098
CCGCGTT0.900.1017
ACGCGGT0.880.09141
ACGCGTT0.870.1096
CGCGTTT0.870.1193
CGCGGTT0.860.0716
AACGCGT0.860.10127
AACCGCG0.860.0985
AAGCGCG0.850.0773