cis; CCACGTG

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
  CCACGTGG   ABREZMRAB28 [ref] [ref] [ref] [ref] [ref] [ref] [ref]
  CCACGTGGCC CPRFPCCHS [ref] [ref]
 GCCACGTGGC  ACGTROOT1 [ref] [ref] [ref]
 GCCACGTGGG  ABREAZMRAB28 [ref] [ref]
 GCCACGTGCC  GBOX10NT
 TCCACGTGTC  SGBFGMGMAUX28 [ref]
 TCCACGTGGC  LREBOXIIPCCHS1 [ref]
 ACCACGTGGC  GBOXPC [ref]
 TCCACGTGGT  GBOXSORBCS1 [ref]
CGCCACGTGTCC ABREBNNAPA [ref] [ref] [ref]
  MCACGTGGC  GBOXLERBCS [ref] [ref] [ref]
   CACGTG    CACGTGMOTIF [ref] [ref] [ref] [ref] [ref] [ref] [ref]
    ACGTG    ABRELATERD1 [ref]
    ACGT     ACGTATERD1 [ref]

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of CCACGTG

[Help]
GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of CCACGTG.

[Help]
correlTFfunction ((alias))*TF family
(link to AGRIS)
0.59At4g27410no apical meristem (NAM) family protein (RD26) ((RD26)) NAC
0.52At3g61890homeobox-leucine zipper protein 12 (HB-12) / HD-ZIP transcription factor 12 ((ATHB-12)) Homeobox
0.50At5g60850Dof-type zinc finger domain-containing protein ((OBP4)) C2C2-Dof
0.48At4g34000ABA-responsive element-binding protein / abscisic acid responsive elements-binding factor (ABRE) / ABA-responsive elements-binding factor (ABF3) ((ABF3, DPBF5)) bZIP
0.47At5g12840CCAAT-binding transcription factor (CBF-B/NF-YA) family protein ((HAP2A)) CCAAT-HAP2
0.46At2g46680homeobox-leucine zipper protein 7 (HB-7) / HD-ZIP transcription factor 7 ((ATHB-7)) Homeobox
0.45At4g21440myb family transcription factor (MYB102) MYB
0.45At3g19290ABA-responsive element-binding protein 2 (AREB2) ((ABF4, AREB2)) bZIP
0.45At1g52890no apical meristem (NAM) family protein NAC
0.44At5g67300myb family transcription factor MYB
-0.44At3g14740PHD finger family protein C2H2
0.43At1g77450no apical meristem (NAM) family protein NAC
-0.43At5g15150homeobox-leucine zipper protein 7 (HAT7) / HD-ZIP protein 7 / HD-ZIP protein (HB-3) ((ATHB-3, HAT7)) Homeobox
0.42At5g62430Dof-type zinc finger domain-containing protein C2C2-Dof
0.42At5g24930zinc finger (B-box type) family protein C2C2-CO-like

link to other 304 cis elements in ATTED

similar seq.
←CCACGTG→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; CACGTGG
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
CCACGTG1.000.0872
GCCACGT0.940.0870
ACGTGGC0.850.09104
CACGTGG0.830.09112
ACACGTG0.790.1162
CGTGTCA0.780.0889
CGTGGCA0.780.08110
GACACGT0.770.0976
ACGTGTC0.750.1184
CCACACA0.750.0753