cis; AACCCTA

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
AAACCCTA  UP2ATMSD [ref]
AAACCCTAA TELOBOXATEEF1AA1 [ref] [ref] [ref]

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of AACCCTA

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of AACCCTA.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.75At3g57150dyskerin, putative / nucleolar protein NAP57, putative ((NAP57)) NAC
0.75At4g3093050S ribosomal protein L21, mitochondrial (RPL21M) ((WRKY32)) WRKY
0.66At1g27050homeobox-leucine zipper family protein Homeobox
0.63At1g71260expressed protein WHIRLY
0.62At5g16070chaperonin, putative TCP
0.61At3g16870zinc finger (GATA type) family protein C2C2-Gata
-0.61At3g02340zinc finger (C3HC4-type RING finger) family protein C3H
0.57At1g61730DNA-binding storekeeper protein-related GeBP
0.55At2g24500zinc finger (C2H2 type) family protein ((FZF)) C2H2
0.55At1g72050zinc finger (C2H2 type) family protein C2H2
0.54At5g02470DP-2 transcription factor, putative (DPA) ((DPA)) E2F-DP
0.53At2g36010E2F transcription factor-3 (E2F3) ((E2F3)) E2F-DP
0.52At1g14410DNA-binding protein-related WHIRLY
0.51At3g14740PHD finger family protein C2H2
0.50At2g02740transcription factor, putative WHIRLY

link to other 304 cis elements in ATTED

similar seq.
←AACCCTA→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; TAGGGTT
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
AACCCTA1.000.1320
AAACCCT0.990.1420
ACCCTAA0.990.1129
ACCCTAG0.980.0920
CCCTAAT0.970.0715
TAGGGTT0.970.0933
AAAACCC0.970.0941
CTAGGGT0.960.0744
AGGGTTT0.960.1033
TTAGGGT0.950.0739