cis; TTAGGGT


Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference


CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of TTAGGGT

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GO IDterm-Log(p)number of
{A; genes in a GO}
numver of
{B; genes with this heptamer}
{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of TTAGGGT.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.69At4g3093050S ribosomal protein L21, mitochondrial (RPL21M) ((WRKY32)) WRKY
0.68At3g57150dyskerin, putative / nucleolar protein NAP57, putative ((NAP57)) NAC
0.61At3g16870zinc finger (GATA type) family protein C2C2-Gata
0.60At1g71260expressed protein WHIRLY
0.59At2g36010E2F transcription factor-3 (E2F3) ((E2F3)) E2F-DP
0.56At1g27050homeobox-leucine zipper family protein Homeobox
0.56At1g61730DNA-binding storekeeper protein-related GeBP
0.55At4g37750ovule development protein aintegumenta (ANT) ((ANT)) AP2-EREBP
0.53At3g22780CXC domain protein (TSO1) ((TSO1)) CPP
0.53At5g16070chaperonin, putative TCP
0.53At5g11510myb family transcription factor (MYB3R4) ((MYB3R-4)) MYB
0.53At4g37130hydroxyproline-rich glycoprotein family protein NAC
0.53At3g01330transcription factor, putative / E2F-like repressor E2L2 (E2L2) ((DEL3)) E2F-DP
0.52At1g16070tubby family protein TUB
-0.52At1g08320bZIP family transcription factor bZIP

link to other 304 cis elements in ATTED

similar seq.
TTAGGGT
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; ACCCTAA
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
TTAGGGT1.000.0739
AGGGTTT0.990.1033
TAGGGTT0.990.0933
GGGTTTT0.980.0819
ACCCTAA0.960.1129
AAACCCT0.950.1420
AACCCTA0.950.1320
CTAGGGT0.950.0744
CCCTAAA0.950.0828
CCCTAAT0.940.0715