cis; GGGTTTT


Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference


CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of GGGTTTT

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GO IDterm-Log(p)number of
{A; genes in a GO}
numver of
{B; genes with this heptamer}
{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of GGGTTTT.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.74At3g57150dyskerin, putative / nucleolar protein NAP57, putative ((NAP57)) NAC
0.74At4g3093050S ribosomal protein L21, mitochondrial (RPL21M) ((WRKY32)) WRKY
0.64At1g71260expressed protein WHIRLY
0.61At3g16870zinc finger (GATA type) family protein C2C2-Gata
0.60At1g27050homeobox-leucine zipper family protein Homeobox
0.59At1g61730DNA-binding storekeeper protein-related GeBP
0.57At2g36010E2F transcription factor-3 (E2F3) ((E2F3)) E2F-DP
0.56At1g72050zinc finger (C2H2 type) family protein C2H2
0.56At5g16070chaperonin, putative TCP
0.55At4g37750ovule development protein aintegumenta (ANT) ((ANT)) AP2-EREBP
0.55At2g24500zinc finger (C2H2 type) family protein ((FZF)) C2H2
-0.54At2g18280tubby-like protein 2 (TULP2) TUB
0.54At4g37130hydroxyproline-rich glycoprotein family protein NAC
0.54At3g52910expressed protein GRF
0.53At5g22480zinc finger (ZPR1-type) family protein C2H2

link to other 304 cis elements in ATTED

similar seq.
GGGTTTT
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; AAAACCC
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
GGGTTTT1.000.0819
AGGGTTT0.990.1033
TAGGGTT0.980.0933
TTAGGGT0.980.0739
ACCCTAA0.960.1129
AAACCCT0.950.1420
CCCTAAA0.950.0828
CTAGGGT0.950.0744
AACCCTA0.940.1320
CCCTAAT0.940.0715