cis; CAAGCGC


Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference


CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of CAAGCGC

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GO IDterm-Log(p)number of
{A; genes in a GO}
numver of
{B; genes with this heptamer}
{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of CAAGCGC.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
-0.49At1g62300WRKY family transcription factor ((WRKY6)) WRKY
-0.45At1g42990bZIP transcription factor family protein bZIP
-0.45At5g63790no apical meristem (NAM) family protein NAC
-0.44At4g18170WRKY family transcription factor ((WRKY28)) WRKY
-0.43At5g24110WRKY family transcription factor ((WRKY30)) WRKY
-0.43At1g77450no apical meristem (NAM) family protein NAC
-0.43At5g59820zinc finger (C2H2 type) family protein (ZAT12) ((RHL41)) C2H2
-0.42At2g33710AP2 domain-containing transcription factor family protein AP2-EREBP
-0.41At3g22830heat shock transcription factor family protein ((AT-HSFA6B)) HSF
-0.41At5g04340zinc finger (C2H2 type) family protein ((C2H2)) C2H2
0.41At3g23690basic helix-loop-helix (bHLH) family protein BHLH
-0.41At2g23320WRKY family transcription factor ((WRKY15)) WRKY
-0.40At4g18890brassinosteroid signalling positive regulator-related BZR
-0.40At3g53600zinc finger (C2H2 type) family protein C2H2
-0.40At3g15210ethylene-responsive element-binding factor 4 (ERF4) ((ATERF4, RAP2.5)) AP2-EREBP

link to other 304 cis elements in ATTED

similar seq.
CAAGCGC
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; GCGCTTG
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
CAAGCGC1.000.0723
CCAAGCG0.750.0670
CCGTAGC0.730.07189
TCCAGAA0.690.07104
CCAGAAC0.610.06114
TCTGGAA0.610.0720