cis; CCGTAGC


Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference


CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of CCGTAGC

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GO IDterm-Log(p)number of
{A; genes in a GO}
numver of
{B; genes with this heptamer}
{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of CCGTAGC.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
no TF correlated.

link to other 304 cis elements in ATTED

similar seq.
CCGTAGC
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; GCTACGG
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
CCGTAGC1.000.07189
TCTGGAA0.770.0720
GCCGACC0.770.0781
CCACCTG0.750.08134
CTCCAGA0.740.0754
CAAGCGC0.730.0723
CTCTGGA0.720.0871
CTCTAGA0.710.1083
CCAAGCG0.700.0670
TTCTAGA0.700.1188