cis; CTAGAAC

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
CTNGAANNTTCNAG HSE [ref]

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of CTAGAAC

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of CTAGAAC.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.62At2g26150heat shock transcription factor family protein ((ATHSFA2)) HSF
0.52At3g63350heat shock transcription factor family protein ((AT-HSFA7B)) HSF
0.49At1g26800zinc finger (C3HC4-type RING finger) family protein C3H
0.49At4g11660heat shock factor protein 7 (HSF7) / heat shock transcription factor 7 (HSTF7) ((AT-HSFB2B)) HSF

link to other 304 cis elements in ATTED

similar seq.
←CTAGAAC→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; GTTCTAG
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
CTAGAAC1.000.1138
TCTAGAA0.790.1580
CTTCTAG0.780.1090
TTCTAGA0.780.1188
TAGAACC0.770.0783
GGCCTTT0.730.06146
TCTGGAA0.700.0720
CTCTAGA0.690.1083
AACCTTC0.690.0735
TTCTGGA0.690.0782