cis; GGCCTTT

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of GGCCTTT

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of GGCCTTT.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.45At5g22480zinc finger (ZPR1-type) family protein C2H2
0.44At1g32330heat shock transcription factor family protein ((ATHSFA1D)) HSF
-0.40At5g47390myb family transcription factor MYB-related

link to other 304 cis elements in ATTED

similar seq.
←GGCCTTT→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; AAAGGCC
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
GGCCTTT1.000.06146
TTCTGGA0.800.0782
TATTGGG0.770.07109
CTAGAAG0.770.0641
ATTGGGC0.730.0999
CTAGAAC0.730.1138
GGGCCTT0.720.0796
TTGGGCT0.720.0780
TGGGCCT0.710.1096
TTGGGCC0.710.0998