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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT4G39680   SAP domain-containing protein 
 ath-r.7   AT4G39680   SAP domain-containing protein 
 ath-m.9   AT4G39680   SAP domain-containing protein 
 ath-e.2   AT4G39680   SAP domain-containing protein 
 ath-m.4.bio   AT4G39680   SAP domain-containing protein 
 ath-m.4.hor   AT4G39680   SAP domain-containing protein 
 ath-m.4.lig   AT4G39680   SAP domain-containing protein 
 ath-m.4.str   AT4G39680   SAP domain-containing protein 
 ath-m.4.tis   AT4G39680   SAP domain-containing protein 
 bra-r.6   103835104   apoptotic chromatin condensation inducer in the nucleus 
 bra-r.6   103851344   apoptotic chromatin condensation inducer in the nucleus 
 bna-r.1   125577105   apoptotic chromatin condensation inducer in the nucleus-like 
 bna-r.1   106439157   apoptotic chromatin condensation inducer in the nucleus-like 
 bna-r.1   106363140   apoptotic chromatin condensation inducer in the nucleus 
 ghi-r.1   107951672   apoptotic chromatin condensation inducer in the nucleus 
 ghi-r.1   107950386   apoptotic chromatin condensation inducer in the nucleus 
 ghi-r.1   107950385   apoptotic chromatin condensation inducer in the nucleus 
 cit-r.1   102612499   uncharacterized LOC102612499 
 gma-u.5   100816245   apoptotic chromatin condensation inducer in the nucleus 
 gma-u.5   100786288   apoptotic chromatin condensation inducer in the nucleus 
 vvi-u.5   100248897   uncharacterized LOC100248897 
 vvi-u.5   100252593   uncharacterized LOC100252593 
 ppo-u.5   7456930   uncharacterized LOC7456930 
 ppo-u.5   7477106   uncharacterized LOC7477106 
 mtr-u.5   11408942   formin-like protein 5 
 mtr-u.5   11439947   actin cytoskeleton-regulatory complex protein PAN1 
 sly-u.5   101245055   putative DNA/RNA binding domain-containing protein 
 sot-r.1   102581657   apoptotic chromatin condensation inducer in the nucleus-like 
 sot-r.1   102582659   apoptotic chromatin condensation inducer in the nucleus-like 
 nta-r.1   107780879   uncharacterized LOC107780879 
 nta-r.1   107787584   uncharacterized LOC107787584 
 nta-r.1   107825767   uncharacterized LOC107825767 
 osa-u.5   4332988   uncharacterized LOC4332988 
 osa-u.5   4343967   uncharacterized LOC4343967 
 zma-u.5   100381870   Putative SAP DNA-binding domain family protein 
 zma-u.5   103635858   formin-like protein 5 
 zma-u.5   100502129   SAP domain-containing protein 
 tae-r.2   123044136   uncharacterized LOC123044136 
 tae-r.2   123091905   apoptotic chromatin condensation inducer in the nucleus 
 tae-r.2   123052015   apoptotic chromatin condensation inducer in the nucleus 
 hvu-r.1   123429672   apoptotic chromatin condensation inducer in the nucleus-like 
 hvu-r.1   123448495   apoptotic chromatin condensation inducer in the nucleus 
 sbi-r.1   110431408   formin-like protein 5 
 bdi-r.1   100830765   SAP domain containing protein 
 bdi-r.1   100828438   apoptotic chromatin condensation inducer in the nucleus 
 cre-r.1   CHLRE_03g204950v5   uncharacterized protein 

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Top 50 coexpressed genes to AT4G39680 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT4G39680 (ath-u.5 coexpression data)

CoexMap"830123"


athAT4G39680 | Entrez gene ID : 830123      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 2 3 3 1 2 2 2 2 1 2 3 2 3 3 2 1 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03013 [list] [network] Nucleocytoplasmic transport (105 genes)
ath03015 [list] [network] mRNA surveillance pathway (119 genes)
ath03040 [list] [network] Spliceosome (243 genes)
GO BP
GO CC
GO:0005886 [list] [network] plasma membrane  (2598 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
GO:0003676 [list] [network] nucleic acid binding  (3104 genes)  IEA  
Protein NP_001078515.1 [sequence] [blastp]
NP_195678.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  plas 1,  cysk 1,  cysk_plas 1  (predict for NP_001078515.1)
nucl 9,  plas 1,  cysk 1,  cysk_plas 1  (predict for NP_195678.1)
Subcellular
localization
TargetP
other 8,  chlo 3  (predict for NP_001078515.1)
other 8,  chlo 3  (predict for NP_195678.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT4G39680
ath-r.7
for
AT4G39680
ath-m.9
for
AT4G39680
ath-e.2
for
AT4G39680
ath-m.4.bio
for
AT4G39680
ath-m.4.hor
for
AT4G39680
ath-m.4.lig
for
AT4G39680
ath-m.4.str
for
AT4G39680
ath-m.4.tis
for
AT4G39680
bra-r.6
for
103835104
bra-r.6
for
103851344
bna-r.1
for
125577105
bna-r.1
for
106439157
bna-r.1
for
106363140
ghi-r.1
for
107951672
ghi-r.1
for
107950386
ghi-r.1
for
107950385
cit-r.1
for
102612499
gma-u.5
for
100816245
gma-u.5
for
100786288
vvi-u.5
for
100248897
vvi-u.5
for
100252593
ppo-u.5
for
7456930
ppo-u.5
for
7477106
mtr-u.5
for
11408942
mtr-u.5
for
11439947
sly-u.5
for
101245055
sot-r.1
for
102581657
sot-r.1
for
102582659
nta-r.1
for
107780879
nta-r.1
for
107787584
nta-r.1
for
107825767
osa-u.5
for
4332988
osa-u.5
for
4343967
zma-u.5
for
100381870
zma-u.5
for
103635858
zma-u.5
for
100502129
tae-r.2
for
123044136
tae-r.2
for
123091905
tae-r.2
for
123052015
hvu-r.1
for
123429672
hvu-r.1
for
123448495
sbi-r.1
for
110431408
bdi-r.1
for
100830765
bdi-r.1
for
100828438
cre-r.1
for
CHLRE_03g204950v5


Ortholog ID: 4116
Species ath bra bra bna bna bna ghi ghi ghi cit gma gma vvi vvi ppo ppo mtr mtr sly sot sot nta nta nta osa osa zma zma zma tae tae tae hvu hvu sbi bdi bdi cre
Symbol AT4G39680 LOC103835104 LOC103851344 LOC125577105 LOC106363140 LOC106361360 LOC107951672 LOC107950386 LOC107950385 LOC102612499 LOC100816245 LOC100786288 LOC100248897 LOC100252593 LOC7456930 LOC7477106 LOC11408942 LOC11439947 LOC101245055 LOC102581657 LOC102582659 LOC107780879 LOC107787584 LOC107825767 LOC4332988 LOC4343967 LOC100381870 LOC103635858 LOC100502129 LOC123044136 LOC123097449 LOC123187881 LOC123429672 LOC123448495 LOC110431408 LOC100830765 LOC100828438 CHLRE_03g204950v5
Function* SAP domain-containing protein apoptotic chromatin condensation inducer in the nucleus apoptotic chromatin condensation inducer in the nucleus apoptotic chromatin condensation inducer in the nucleus-like apoptotic chromatin condensation inducer in the nucleus apoptotic chromatin condensation inducer in the nucleus apoptotic chromatin condensation inducer in the nucleus apoptotic chromatin condensation inducer in the nucleus apoptotic chromatin condensation inducer in the nucleus uncharacterized LOC102612499 apoptotic chromatin condensation inducer in the nucleus apoptotic chromatin condensation inducer in the nucleus uncharacterized LOC100248897 uncharacterized LOC100252593 uncharacterized LOC7456930 uncharacterized LOC7477106 formin-like protein 5 actin cytoskeleton-regulatory complex protein PAN1 putative DNA/RNA binding domain-containing protein apoptotic chromatin condensation inducer in the nucleus-like apoptotic chromatin condensation inducer in the nucleus-like uncharacterized LOC107780879 uncharacterized LOC107787584 uncharacterized LOC107825767 uncharacterized LOC4332988 uncharacterized LOC4343967 Putative SAP DNA-binding domain family protein formin-like protein 5 SAP domain-containing protein uncharacterized LOC123044136 titin homolog apoptotic chromatin condensation inducer in the nucleus apoptotic chromatin condensation inducer in the nucleus-like apoptotic chromatin condensation inducer in the nucleus formin-like protein 5 SAP domain containing protein apoptotic chromatin condensation inducer in the nucleus uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 3
bra03013 Nucleocytoplasmic transport 2
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00561 Glycerolipid metabolism 2
bra00564 Glycerophospholipid metabolism 2
bra03013 Nucleocytoplasmic transport 2
bra03015 mRNA surveillance pathway 2
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 5
bna03013 Nucleocytoplasmic transport 4
bna03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 4
bna03015 mRNA surveillance pathway 4
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 4
bna03015 mRNA surveillance pathway 4
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 4
ghi03015 mRNA surveillance pathway 4
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 4
ghi03015 mRNA surveillance pathway 4
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 4
ghi03015 mRNA surveillance pathway 4
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 5
cit03013 Nucleocytoplasmic transport 3
cit03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma03015 mRNA surveillance pathway 3
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03013 Nucleocytoplasmic transport 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 5
ppo03013 Nucleocytoplasmic transport 3
ppo03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 8
ppo03013 Nucleocytoplasmic transport 4
ppo03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03015 mRNA surveillance pathway 3
mtr03018 RNA degradation 2
mtr03013 Nucleocytoplasmic transport 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03020 RNA polymerase 2
mtr00790 Folate biosynthesis 2
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 3
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 3
sot03040 Spliceosome 3
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
sot03013 Nucleocytoplasmic transport 2
sot03015 mRNA surveillance pathway 2
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 4
nta03013 Nucleocytoplasmic transport 3
nta03040 Spliceosome 3
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 4
nta03015 mRNA surveillance pathway 4
nta03040 Spliceosome 3
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 3
nta03015 mRNA surveillance pathway 3
nta03040 Spliceosome 3
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 2
zma03015 mRNA surveillance pathway 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 2
zma03015 mRNA surveillance pathway 2
zma03040 Spliceosome 2
zma00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 3
tae03040 Spliceosome 3
tae03082 ATP-dependent chromatin remodeling 3
tae03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 4
tae03013 Nucleocytoplasmic transport 3
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03440 Homologous recombination 3
tae03050 Proteasome 3
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 3
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03015 mRNA surveillance pathway 4
hvu03013 Nucleocytoplasmic transport 3
hvu03440 Homologous recombination 3
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 2
hvu03013 Nucleocytoplasmic transport 2
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 2
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 7
bdi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 2
bdi03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830123 103835104 103851344 125577105 106363140 106361360 107951672 107950386 107950385 102612499 100816245 100786288 100248897 100252593 7456930 7477106 11408942 11439947 101245055 102581657 102582659 107780879 107787584 107825767 4332988 4343967 100381870 103635858 100502129 123044136 123097449 123187881 123429672 123448495 110431408 100830765 100828438 66053035
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