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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT5G35680   Nucleic acid-binding, OB-fold-like protein 
 ath-r.7   AT5G35680   Nucleic acid-binding, OB-fold-like protein 
 ath-m.9   AT5G35680   Nucleic acid-binding, OB-fold-like protein 
 ath-e.2   AT5G35680   Nucleic acid-binding, OB-fold-like protein 
 ath-m.4.bio   AT5G35680   Nucleic acid-binding, OB-fold-like protein 
 ath-m.4.hor   AT5G35680   Nucleic acid-binding, OB-fold-like protein 
 ath-m.4.lig   AT5G35680   Nucleic acid-binding, OB-fold-like protein 
 ath-m.4.str   AT5G35680   Nucleic acid-binding, OB-fold-like protein 
 ath-m.4.tis   AT5G35680   Nucleic acid-binding, OB-fold-like protein 
 ath-u.5   AT2G04520   Nucleic acid-binding, OB-fold-like protein 
 bra-r.6   103860302   eukaryotic translation initiation factor 1A 
 bna-r.1   106361826   eukaryotic translation initiation factor 1A 
 bna-r.1   106357786   eukaryotic translation initiation factor 1A 
 ghi-r.1   107950009   eukaryotic translation initiation factor 1A 
 ghi-r.1   107900933   eukaryotic translation initiation factor 1A 
 ghi-r.1   107912617   eukaryotic translation initiation factor 1A 
 cit-r.1   102631211   eukaryotic translation initiation factor 1A 
 cit-r.1   127901042   eukaryotic translation initiation factor 1A-like 
 cit-r.1   102627510   eukaryotic translation initiation factor 1A 
 gma-u.5   100818207   eukaryotic translation initiation factor 1A 
 gma-u.5   100780794   eukaryotic translation initiation factor 1A 
 gma-u.5   100777129   eukaryotic translation initiation factor 1A 
 vvi-u.5   100263709   eukaryotic translation initiation factor 1A 
 vvi-u.5   100252402   eukaryotic translation initiation factor 1A 
 ppo-u.5   7468539   eukaryotic translation initiation factor 1A 
 ppo-u.5   7458275   eukaryotic translation initiation factor 1A 
 mtr-u.5   25500774   eukaryotic translation initiation factor 1A 
 mtr-u.5   11417783   eukaryotic translation initiation factor 1A 
 sly-u.5   101253491   eukaryotic translation initiation factor 1A 
 sly-u.5   101248917   S1-like RNA-binding domain-containing protein 
 sot-r.1   102595476   eukaryotic translation initiation factor 1A-like 
 sot-r.1   102595704   eukaryotic translation initiation factor 1A-like 
 sot-r.1   102580273   eukaryotic translation initiation factor 1A-like 
 nta-r.1   107820365   eukaryotic translation initiation factor 1A 
 nta-r.1   107818117   eukaryotic translation initiation factor 1A-like 
 nta-r.1   107808437   eukaryotic translation initiation factor 1A-like 
 osa-u.5   4329091   eukaryotic translation initiation factor 1A 
 zma-u.5   107548100   Nucleic acid-binding OB-fold-like protein 
 zma-u.5   100282617   eukaryotic translation initiation factor 1A 
 zma-u.5   100273317   uncharacterized LOC100273317 
 tae-r.2   123166543   eukaryotic translation initiation factor 1A 
 tae-r.2   123147738   eukaryotic translation initiation factor 1A-like 
 tae-r.2   123157289   eukaryotic translation initiation factor 1A-like 
 hvu-r.1   123410078   eukaryotic translation initiation factor 1A 
 sbi-r.1   8070729   eukaryotic translation initiation factor 1A 
 sbi-r.1   8077775   eukaryotic translation initiation factor 1A 
 bdi-r.1   100840401   eukaryotic translation initiation factor 1A 
 cre-r.1   CHLRE_02g103550v5   uncharacterized protein 

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Top 50 coexpressed genes to AT5G35680 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G35680 (ath-u.5 coexpression data)

CoexMap"833541"


athAT5G35680 | Entrez gene ID : 833541    
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 10 1 2 3 3 3 2 2 2 2 3 3 1 3 3 1 2 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005829 [list] [network] cytosol  (2593 genes)  RCA  
GO:0009536 [list] [network] plastid  (5443 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1514 genes)  IDA  
GO:0003723 [list] [network] RNA binding  (1764 genes)  IEA  
Protein NP_001190425.1 [sequence] [blastp]
NP_198418.1 [sequence] [blastp]
NP_851095.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 2,  cysk_nucl 2,  plas 1,  pero 1  (predict for NP_001190425.1)
nucl 4,  cyto 3,  chlo 1,  mito 1,  plas 1,  extr 1,  chlo_mito 1,  mito_plas 1  (predict for NP_198418.1)
nucl 4,  cyto 3,  chlo 1,  mito 1,  plas 1,  extr 1,  chlo_mito 1,  mito_plas 1  (predict for NP_851095.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001190425.1)
other 9  (predict for NP_198418.1)
other 9  (predict for NP_851095.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT5G35680
ath-r.7
for
AT5G35680
ath-m.9
for
AT5G35680
ath-e.2
for
AT5G35680
ath-m.4.bio
for
AT5G35680
ath-m.4.hor
for
AT5G35680
ath-m.4.lig
for
AT5G35680
ath-m.4.str
for
AT5G35680
ath-m.4.tis
for
AT5G35680
ath-u.5
for
AT2G04520
bra-r.6
for
103860302
bna-r.1
for
106361826
bna-r.1
for
106357786
ghi-r.1
for
107950009
ghi-r.1
for
107900933
ghi-r.1
for
107912617
cit-r.1
for
102631211
cit-r.1
for
127901042
cit-r.1
for
102627510
gma-u.5
for
100818207
gma-u.5
for
100780794
gma-u.5
for
100777129
vvi-u.5
for
100263709
vvi-u.5
for
100252402
ppo-u.5
for
7468539
ppo-u.5
for
7458275
mtr-u.5
for
25500774
mtr-u.5
for
11417783
sly-u.5
for
101253491
sly-u.5
for
101248917
sot-r.1
for
102595476
sot-r.1
for
102595704
sot-r.1
for
102580273
nta-r.1
for
107820365
nta-r.1
for
107818117
nta-r.1
for
107808437
osa-u.5
for
4329091
zma-u.5
for
107548100
zma-u.5
for
100282617
zma-u.5
for
100273317
tae-r.2
for
123166543
tae-r.2
for
123147738
tae-r.2
for
123157289
hvu-r.1
for
123410078
sbi-r.1
for
8070729
sbi-r.1
for
8077775
bdi-r.1
for
100840401
cre-r.1
for
CHLRE_02g103550v5


Ortholog ID: 1832
Species ath ath bra bna bna ghi ghi ghi cit cit cit gma gma gma vvi vvi ppo ppo mtr mtr sly sly sot sot sot nta nta nta osa zma zma zma tae tae tae hvu sbi sbi bdi cre
Symbol AT5G35680 AT2G04520 LOC103828531 LOC106390792 LOC106406676 LOC107900933 LOC121210900 LOC107955729 LOC102631211 LOC127901042 LOC102627510 LOC100818207 LOC100777129 LOC100780715 LOC100263709 LOC100252402 LOC7468539 LOC7458275 LOC25500774 LOC11417783 LOC101253491 LOC101248917 LOC102595476 LOC102595704 LOC102580273 LOC107820365 LOC107806523 LOC107831877 LOC4329091 LOC107548100 LOC100282617 LOC100273317 LOC123166543 LOC123147738 LOC123157289 LOC123410078 LOC8070729 LOC8077775 LOC100840401 CHLRE_02g103550v5
Function* Nucleic acid-binding, OB-fold-like protein Nucleic acid-binding, OB-fold-like protein eukaryotic translation initiation factor 1A eukaryotic translation initiation factor 1A eukaryotic translation initiation factor 1A eukaryotic translation initiation factor 1A eukaryotic translation initiation factor 1A eukaryotic translation initiation factor 1A eukaryotic translation initiation factor 1A eukaryotic translation initiation factor 1A-like eukaryotic translation initiation factor 1A eukaryotic translation initiation factor 1A eukaryotic translation initiation factor 1A eukaryotic translation initiation factor 1A eukaryotic translation initiation factor 1A eukaryotic translation initiation factor 1A eukaryotic translation initiation factor 1A eukaryotic translation initiation factor 1A eukaryotic translation initiation factor 1A eukaryotic translation initiation factor 1A eukaryotic translation initiation factor 1A S1-like RNA-binding domain-containing protein eukaryotic translation initiation factor 1A-like eukaryotic translation initiation factor 1A-like eukaryotic translation initiation factor 1A-like eukaryotic translation initiation factor 1A eukaryotic translation initiation factor 1A eukaryotic translation initiation factor 1A-like eukaryotic translation initiation factor 1A Nucleic acid-binding OB-fold-like protein eukaryotic translation initiation factor 1A uncharacterized LOC100273317 eukaryotic translation initiation factor 1A eukaryotic translation initiation factor 1A-like eukaryotic translation initiation factor 1A-like eukaryotic translation initiation factor 1A eukaryotic translation initiation factor 1A eukaryotic translation initiation factor 1A eukaryotic translation initiation factor 1A uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 2
bna00500 Starch and sucrose metabolism 2
bna03020 RNA polymerase 2
bna03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 2
bna00500 Starch and sucrose metabolism 2
bna03020 RNA polymerase 2
bna03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 6
ghi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00480 Glutathione metabolism 3
ghi03040 Spliceosome 2
ghi03083 Polycomb repressive complex 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00564 Glycerophospholipid metabolism 2
cit00740 Riboflavin metabolism 2
cit04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00564 Glycerophospholipid metabolism 2
cit00740 Riboflavin metabolism 2
cit04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
gma00750 Vitamin B6 metabolism 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 3
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04145 Phagosome 2
vvi04144 Endocytosis 2
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 14
ppo04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 4
sly04120 Ubiquitin mediated proteolysis 3
sly04130 SNARE interactions in vesicular transport 2
sly03040 Spliceosome 2
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
sly04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 3
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00100 Steroid biosynthesis 2
nta00909 Sesquiterpenoid and triterpenoid biosynthesis 2
nta00592 alpha-Linolenic acid metabolism 2
nta03060 Protein export 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04016 MAPK signaling pathway - plant 4
zma04070 Phosphatidylinositol signaling system 4
zma04075 Plant hormone signal transduction 4
zma04626 Plant-pathogen interaction 4
zma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 4
zma04120 Ubiquitin mediated proteolysis 3
zma04141 Protein processing in endoplasmic reticulum 3
zma03083 Polycomb repressive complex 2
zma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
hvu03050 Proteasome 3
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03083 Polycomb repressive complex 5
sbi04120 Ubiquitin mediated proteolysis 5
sbi04141 Protein processing in endoplasmic reticulum 5
sbi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03083 Polycomb repressive complex 2
sbi04120 Ubiquitin mediated proteolysis 2
sbi04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 833541 814994 103828531 106390792 106406676 107900933 121210900 107955729 102631211 127901042 102627510 100818207 100777129 100780715 100263709 100252402 7468539 7458275 25500774 11417783 101253491 101248917 102595476 102595704 102580273 107820365 107806523 107831877 4329091 107548100 100282617 100273317 123166543 123147738 123157289 123410078 8070729 8077775 100840401 5725332
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