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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   127901042   eukaryotic translation initiation factor 1A-like 
 cit-r.1   102627510   eukaryotic translation initiation factor 1A 
 cit-r.1   102631211   eukaryotic translation initiation factor 1A 
 ath-u.5   AT2G04520   Nucleic acid-binding, OB-fold-like protein 
 ath-u.5   AT5G35680   Nucleic acid-binding, OB-fold-like protein 
 bra-r.6   103828531   eukaryotic translation initiation factor 1A 
 ghi-r.1   107912617   eukaryotic translation initiation factor 1A 
 ghi-r.1   107924328   eukaryotic translation initiation factor 1A 
 ghi-r.1   107933525   eukaryotic translation initiation factor 1A 
 bna-r.1   106390792   eukaryotic translation initiation factor 1A 
 gma-u.5   100818207   eukaryotic translation initiation factor 1A 
 gma-u.5   100780794   eukaryotic translation initiation factor 1A 
 gma-u.5   100780715   eukaryotic translation initiation factor 1A 
 vvi-u.5   100252402   eukaryotic translation initiation factor 1A 
 vvi-u.5   100263709   eukaryotic translation initiation factor 1A 
 ppo-u.5   7468539   eukaryotic translation initiation factor 1A 
 ppo-u.5   7458275   eukaryotic translation initiation factor 1A 
 mtr-u.5   11417783   eukaryotic translation initiation factor 1A 
 mtr-u.5   25500774   eukaryotic translation initiation factor 1A 
 sly-u.5   101253491   eukaryotic translation initiation factor 1A 
 sly-u.5   101248917   S1-like RNA-binding domain-containing protein 
 sot-r.1   102580273   eukaryotic translation initiation factor 1A-like 
 sot-r.1   102595476   eukaryotic translation initiation factor 1A-like 
 sot-r.1   102595704   eukaryotic translation initiation factor 1A-like 
 nta-r.1   107804148   eukaryotic translation initiation factor 1A 
 nta-r.1   107820365   eukaryotic translation initiation factor 1A 
 nta-r.1   107818117   eukaryotic translation initiation factor 1A-like 
 osa-u.5   4329091   eukaryotic translation initiation factor 1A 
 zma-u.5   100273317   uncharacterized LOC100273317 
 zma-u.5   107548100   Nucleic acid-binding OB-fold-like protein 
 zma-u.5   100282617   eukaryotic translation initiation factor 1A 
 tae-r.2   123166543   eukaryotic translation initiation factor 1A 
 tae-r.2   123147738   eukaryotic translation initiation factor 1A-like 
 tae-r.2   123157289   eukaryotic translation initiation factor 1A-like 
 hvu-r.1   123410078   eukaryotic translation initiation factor 1A 
 sbi-r.1   8077775   eukaryotic translation initiation factor 1A 
 sbi-r.1   8070729   eukaryotic translation initiation factor 1A 
 bdi-r.1   100840401   eukaryotic translation initiation factor 1A 
 cre-r.1   CHLRE_02g103550v5   uncharacterized protein 

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Top 50 coexpressed genes to 127901042 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 127901042 (cit-r.1 coexpression data)

CoexMap"127901042"


citLOC127901042 | Entrez gene ID : 127901042    
Species cit ath bra ghi bna gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 2 1 3 1 3 2 2 2 2 3 3 1 3 3 1 2 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006413 [list] [network] translational initiation  (42 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (4272 genes)  IEA  
GO MF
GO:0003743 [list] [network] translation initiation factor activity  (57 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1117 genes)  IEA  
Protein XP_052292862.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 3,  cyto 3,  cysk_nucl 2,  mito 1,  extr 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_052292862.1)
Subcellular
localization
TargetP
other 9  (predict for XP_052292862.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
127901042
cit-r.1
for
102627510
cit-r.1
for
102631211
ath-u.5
for
AT2G04520
ath-u.5
for
AT5G35680
bra-r.6
for
103828531
ghi-r.1
for
107912617
ghi-r.1
for
107924328
ghi-r.1
for
107933525
bna-r.1
for
106390792
gma-u.5
for
100818207
gma-u.5
for
100780794
gma-u.5
for
100780715
vvi-u.5
for
100252402
vvi-u.5
for
100263709
ppo-u.5
for
7468539
ppo-u.5
for
7458275
mtr-u.5
for
11417783
mtr-u.5
for
25500774
sly-u.5
for
101253491
sly-u.5
for
101248917
sot-r.1
for
102580273
sot-r.1
for
102595476
sot-r.1
for
102595704
nta-r.1
for
107804148
nta-r.1
for
107820365
nta-r.1
for
107818117
osa-u.5
for
4329091
zma-u.5
for
100273317
zma-u.5
for
107548100
zma-u.5
for
100282617
tae-r.2
for
123166543
tae-r.2
for
123147738
tae-r.2
for
123157289
hvu-r.1
for
123410078
sbi-r.1
for
8077775
sbi-r.1
for
8070729
bdi-r.1
for
100840401
cre-r.1
for
CHLRE_02g103550v5


Ortholog ID: 1832
Species cit cit cit ath ath bra ghi ghi ghi bna bna gma gma gma vvi vvi ppo ppo mtr mtr sly sly sot sot sot nta nta nta osa zma zma zma tae tae tae hvu sbi sbi bdi cre
Symbol LOC127901042 LOC102627510 LOC102631211 AT2G04520 AT5G35680 LOC103828531 LOC121210900 LOC107955729 LOC107900933 LOC106390792 LOC106406676 LOC100818207 LOC100780715 LOC100777129 LOC100252402 LOC100263709 LOC7468539 LOC7458275 LOC11417783 LOC25500774 LOC101253491 LOC101248917 LOC102580273 LOC102595476 LOC102595704 LOC107820365 LOC107806523 LOC107831877 LOC4329091 LOC100273317 LOC107548100 LOC100282617 LOC123166543 LOC123147738 LOC123157289 LOC123410078 LOC8077775 LOC8070729 LOC100840401 CHLRE_02g103550v5
Function* eukaryotic translation initiation factor 1A-like eukaryotic translation initiation factor 1A eukaryotic translation initiation factor 1A Nucleic acid-binding, OB-fold-like protein Nucleic acid-binding, OB-fold-like protein eukaryotic translation initiation factor 1A eukaryotic translation initiation factor 1A eukaryotic translation initiation factor 1A eukaryotic translation initiation factor 1A eukaryotic translation initiation factor 1A eukaryotic translation initiation factor 1A eukaryotic translation initiation factor 1A eukaryotic translation initiation factor 1A eukaryotic translation initiation factor 1A eukaryotic translation initiation factor 1A eukaryotic translation initiation factor 1A eukaryotic translation initiation factor 1A eukaryotic translation initiation factor 1A eukaryotic translation initiation factor 1A eukaryotic translation initiation factor 1A eukaryotic translation initiation factor 1A S1-like RNA-binding domain-containing protein eukaryotic translation initiation factor 1A-like eukaryotic translation initiation factor 1A-like eukaryotic translation initiation factor 1A-like eukaryotic translation initiation factor 1A eukaryotic translation initiation factor 1A eukaryotic translation initiation factor 1A-like eukaryotic translation initiation factor 1A uncharacterized LOC100273317 Nucleic acid-binding OB-fold-like protein eukaryotic translation initiation factor 1A eukaryotic translation initiation factor 1A eukaryotic translation initiation factor 1A-like eukaryotic translation initiation factor 1A-like eukaryotic translation initiation factor 1A eukaryotic translation initiation factor 1A eukaryotic translation initiation factor 1A eukaryotic translation initiation factor 1A uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00564 Glycerophospholipid metabolism 2
cit00740 Riboflavin metabolism 2
cit04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00564 Glycerophospholipid metabolism 2
cit00740 Riboflavin metabolism 2
cit04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00480 Glutathione metabolism 3
ghi03040 Spliceosome 2
ghi03083 Polycomb repressive complex 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 6
ghi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 2
bna00500 Starch and sucrose metabolism 2
bna03020 RNA polymerase 2
bna03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 2
bna00500 Starch and sucrose metabolism 2
bna03020 RNA polymerase 2
bna03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 3
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
gma00750 Vitamin B6 metabolism 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04145 Phagosome 2
vvi04144 Endocytosis 2
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 14
ppo04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 4
sly04120 Ubiquitin mediated proteolysis 3
sly04130 SNARE interactions in vesicular transport 2
sly03040 Spliceosome 2
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
sly04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 3
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00100 Steroid biosynthesis 2
nta00909 Sesquiterpenoid and triterpenoid biosynthesis 2
nta00592 alpha-Linolenic acid metabolism 2
nta03060 Protein export 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 4
zma04120 Ubiquitin mediated proteolysis 3
zma04141 Protein processing in endoplasmic reticulum 3
zma03083 Polycomb repressive complex 2
zma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04016 MAPK signaling pathway - plant 4
zma04070 Phosphatidylinositol signaling system 4
zma04075 Plant hormone signal transduction 4
zma04626 Plant-pathogen interaction 4
zma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
hvu03050 Proteasome 3
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03083 Polycomb repressive complex 2
sbi04120 Ubiquitin mediated proteolysis 2
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03083 Polycomb repressive complex 5
sbi04120 Ubiquitin mediated proteolysis 5
sbi04141 Protein processing in endoplasmic reticulum 5
sbi03050 Proteasome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 127901042 102627510 102631211 814994 833541 103828531 121210900 107955729 107900933 106390792 106406676 100818207 100780715 100777129 100252402 100263709 7468539 7458275 11417783 25500774 101253491 101248917 102580273 102595476 102595704 107820365 107806523 107831877 4329091 100273317 107548100 100282617 123166543 123147738 123157289 123410078 8077775 8070729 100840401 5725332
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