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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8070729   eukaryotic translation initiation factor 1A 
 zma-u.5   100282617   eukaryotic translation initiation factor 1A 
 zma-u.5   107548100   Nucleic acid-binding OB-fold-like protein 
 zma-u.5   100273317   uncharacterized LOC100273317 
 osa-u.5   4329091   eukaryotic translation initiation factor 1A 
 ath-u.5   AT2G04520   Nucleic acid-binding, OB-fold-like protein 
 ath-u.5   AT5G35680   Nucleic acid-binding, OB-fold-like protein 
 gma-u.5   100780794   eukaryotic translation initiation factor 1A 
 gma-u.5   100780715   eukaryotic translation initiation factor 1A 
 gma-u.5   100818207   eukaryotic translation initiation factor 1A 
 sly-u.5   101253491   eukaryotic translation initiation factor 1A 
 sly-u.5   101248917   S1-like RNA-binding domain-containing protein 
 vvi-u.5   100263709   eukaryotic translation initiation factor 1A 
 vvi-u.5   100252402   eukaryotic translation initiation factor 1A 
 ppo-u.5   7458275   eukaryotic translation initiation factor 1A 
 ppo-u.5   7468539   eukaryotic translation initiation factor 1A 
 mtr-u.5   11417783   eukaryotic translation initiation factor 1A 
 mtr-u.5   25500774   eukaryotic translation initiation factor 1A 

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Top 50 coexpressed genes to 8070729 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8070729 (sbi-r.1 coexpression data)

CoexMap"8070729"


sbiLOC8070729 | Entrez gene ID : 8070729    
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 3 1 2 3 2 2 2 2 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006413 [list] [network] translational initiation  (45 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (4816 genes)  IEA  
GO MF
GO:0003743 [list] [network] translation initiation factor activity  (59 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1243 genes)  IEA  
Protein XP_002437817.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_002437817.1)
Subcellular
localization
TargetP
other 9  (predict for XP_002437817.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8070729

.
zma-u.5
for
100282617

.
zma-u.5
for
107548100

.
zma-u.5
for
100273317

.
osa-u.5
for
4329091

.
ath-u.5
for
AT2G04520

.
ath-u.5
for
AT5G35680

.
gma-u.5
for
100780794

.
gma-u.5
for
100780715

.
gma-u.5
for
100818207

.
sly-u.5
for
101253491

.
sly-u.5
for
101248917

.
vvi-u.5
for
100263709

.
vvi-u.5
for
100252402

.
ppo-u.5
for
7458275

.
ppo-u.5
for
7468539

.
mtr-u.5
for
11417783

.
mtr-u.5
for
25500774

.


Ortholog ID: 1832
Species ath ath gma gma sly sly osa zma zma bra vvi vvi ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi nta nta
Symbol AT5G35680 AT2G04520 LOC100818207 LOC100777129 LOC101253491 LOC101248917 LOC4329091 LOC100273317 LOC107548100 LOC103828531 LOC100263709 LOC100252402 LOC7458275 LOC25500774 LOC11417783 LOC123157289 LOC123166543 LOC123410078 LOC107900933 LOC107955729 LOC106390792 LOC106406676 CHLRE_02g103550v5 LOC8070729 LOC8077775 LOC102580273 LOC102595704 LOC102631211 LOC127901042 LOC100840401 LOC107806523 LOC107831877
Function* Nucleic acid-binding, OB-fold-like protein Nucleic acid-binding, OB-fold-like protein eukaryotic translation initiation factor 1A eukaryotic translation initiation factor 1A eukaryotic translation initiation factor 1A S1-like RNA-binding domain-containing protein eukaryotic translation initiation factor 1A uncharacterized LOC100273317 Nucleic acid-binding OB-fold-like protein eukaryotic translation initiation factor 1A eukaryotic translation initiation factor 1A eukaryotic translation initiation factor 1A eukaryotic translation initiation factor 1A eukaryotic translation initiation factor 1A eukaryotic translation initiation factor 1A eukaryotic translation initiation factor 1A-like eukaryotic translation initiation factor 1A eukaryotic translation initiation factor 1A eukaryotic translation initiation factor 1A eukaryotic translation initiation factor 1A eukaryotic translation initiation factor 1A eukaryotic translation initiation factor 1A uncharacterized protein eukaryotic translation initiation factor 1A eukaryotic translation initiation factor 1A eukaryotic translation initiation factor 1A-like eukaryotic translation initiation factor 1A-like eukaryotic translation initiation factor 1A eukaryotic translation initiation factor 1A-like eukaryotic translation initiation factor 1A eukaryotic translation initiation factor 1A eukaryotic translation initiation factor 1A-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
gma00750 Vitamin B6 metabolism 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 4
sly04120 Ubiquitin mediated proteolysis 3
sly04130 SNARE interactions in vesicular transport 2
sly03040 Spliceosome 2
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
sly04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 4
zma04120 Ubiquitin mediated proteolysis 3
zma04141 Protein processing in endoplasmic reticulum 3
zma03083 Polycomb repressive complex 2
zma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04145 Phagosome 2
vvi04144 Endocytosis 2
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
hvu03050 Proteasome 3
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 6
ghi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00480 Glutathione metabolism 3
ghi03040 Spliceosome 2
ghi03083 Polycomb repressive complex 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 2
bna00500 Starch and sucrose metabolism 2
bna03020 RNA polymerase 2
bna03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 2
bna00500 Starch and sucrose metabolism 2
bna03020 RNA polymerase 2
bna03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03083 Polycomb repressive complex 5
sbi04120 Ubiquitin mediated proteolysis 5
sbi04141 Protein processing in endoplasmic reticulum 5
sbi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03083 Polycomb repressive complex 2
sbi04120 Ubiquitin mediated proteolysis 2
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 3
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00564 Glycerophospholipid metabolism 2
cit00740 Riboflavin metabolism 2
cit04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00564 Glycerophospholipid metabolism 2
cit00740 Riboflavin metabolism 2
cit04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00100 Steroid biosynthesis 2
nta00909 Sesquiterpenoid and triterpenoid biosynthesis 2
nta00592 alpha-Linolenic acid metabolism 2
nta03060 Protein export 2
nta04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 833541 814994 100818207 100777129 101253491 101248917 4329091 100273317 107548100 103828531 100263709 100252402 7458275 25500774 11417783 123157289 123166543 123410078 107900933 107955729 106390792 106406676 5725332 8070729 8077775 102580273 102595704 102631211 127901042 100840401 107806523 107831877
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