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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT1G31050   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-r.7   AT1G31050   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-m.9   AT1G31050   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-e.2   AT1G31050   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-m.4.bio   AT1G31050   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-m.4.hor   AT1G31050   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-m.4.lig   AT1G31050   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-m.4.str   AT1G31050   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-m.4.tis   AT1G31050   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 gma-u.5   100793512   transcription factor bHLH111 
 gma-u.5   100527800   basic helix-loop-helix (bHLH) DNA-binding protein 
 vvi-u.5   100240845   transcription factor bHLH111 
 ppo-u.5   7459079   transcription factor bHLH111 
 ppo-u.5   7457838   transcription factor bHLH111 
 mtr-u.5   25484910   transcription factor bHLH111 
 sly-u.5   101252913   transcription factor bHLH112 
 osa-u.5   4343202   uncharacterized LOC4343202 
 zma-u.5   103647665   transcription factor bHLH111 
 zma-u.5   103633112   uncharacterized LOC103633112 

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Top 50 coexpressed genes to AT1G31050 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT1G31050 (ath-u.5 coexpression data)

CoexMap"839991"


athAT1G31050 | Entrez gene ID : 839991      
Species ath gma vvi ppo mtr sly osa zma sot hvu tae cit sbi ghi cre bna nta bdi bra
Paralog 9 2 1 2 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  IEA ISS TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0046983 [list] [network] protein dimerization activity  (446 genes)  IEA  
GO:0000976 [list] [network] transcription cis-regulatory region binding  (716 genes)  IPI  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  IEA ISS  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001321890.1 [sequence] [blastp]
NP_001321891.1 [sequence] [blastp]
NP_001321892.1 [sequence] [blastp]
NP_001321893.1 [sequence] [blastp]
NP_001321894.1 [sequence] [blastp]
NP_001321895.1 [sequence] [blastp]
NP_001321896.1 [sequence] [blastp]
NP_174391.5 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for NP_001321890.1)
nucl 9  (predict for NP_001321891.1)
nucl 6,  chlo 1,  cyto 1,  mito 1,  E.R. 1,  golg 1,  chlo_mito 1,  cyto_E.R. 1  (predict for NP_001321892.1)
nucl 6,  golg 1,  chlo 1,  cyto 1,  mito 1,  E.R. 1,  chlo_mito 1,  golg_plas 1,  cyto_E.R. 1  (predict for NP_001321893.1)
nucl 10  (predict for NP_001321894.1)
nucl 10  (predict for NP_001321895.1)
nucl 9  (predict for NP_001321896.1)
nucl 9  (predict for NP_174391.5)
Subcellular
localization
TargetP
other 7,  chlo 5  (predict for NP_001321890.1)
other 7,  chlo 5  (predict for NP_001321891.1)
other 7,  chlo 5  (predict for NP_001321892.1)
other 7,  chlo 5  (predict for NP_001321893.1)
other 7,  chlo 5  (predict for NP_001321894.1)
other 7,  chlo 5  (predict for NP_001321895.1)
other 7,  chlo 5  (predict for NP_001321896.1)
other 7,  chlo 5  (predict for NP_174391.5)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT1G31050

.
ath-r.7
for
AT1G31050

.
ath-m.9
for
AT1G31050

.
ath-e.2
for
AT1G31050

.
ath-m.4.bio
for
AT1G31050

.
ath-m.4.hor
for
AT1G31050

.
ath-m.4.lig
for
AT1G31050

.
ath-m.4.str
for
AT1G31050

.
ath-m.4.tis
for
AT1G31050

.
gma-u.5
for
100793512

.
gma-u.5
for
100527800

.
vvi-u.5
for
100240845

.
ppo-u.5
for
7459079

.
ppo-u.5
for
7457838

.
mtr-u.5
for
25484910

.
sly-u.5
for
101252913

.
osa-u.5
for
4343202

.
zma-u.5
for
103647665

.
zma-u.5
for
103633112

.


Ortholog ID: 9820
Species ath gma gma sly osa zma zma bra vvi ppo ppo mtr ghi ghi bna bna sbi sot cit bdi nta
Symbol AT1G31050 LOC100793512 LOC100527800 LOC101252913 LOC4343202 LOC103647665 LOC103633112 LOC103840273 LOC100240845 LOC7459079 LOC7457838 LOC25484910 LOC107909931 LOC107897758 LOC106364379 LOC106352369 LOC8077274 LOC102589772 LOC102610751 LOC100841083 LOC107772681
Function* basic helix-loop-helix (bHLH) DNA-binding superfamily protein transcription factor bHLH111 basic helix-loop-helix (bHLH) DNA-binding protein transcription factor bHLH112 uncharacterized LOC4343202 transcription factor bHLH111 uncharacterized LOC103633112 transcription factor bHLH111 transcription factor bHLH111 transcription factor bHLH111 transcription factor bHLH111 transcription factor bHLH111 transcription factor bHLH111 transcription factor bHLH111 transcription factor bHLH111 transcription factor bHLH111 transcription factor bHLH111 transcription factor bHLH111 transcription factor bHLH111 transcription factor bHLH111 uncharacterized LOC107772681
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta02010 ABC transporters 2
nta04981 Folate transport and metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839991 100793512 100527800 101252913 4343202 103647665 103633112 103840273 100240845 7459079 7457838 25484910 107909931 107897758 106364379 106352369 8077274 102589772 102610751 100841083 107772681
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