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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107909931   transcription factor bHLH111 
 ath-u.5   AT1G31050   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 gma-u.5   100793512   transcription factor bHLH111 
 gma-u.5   100527800   basic helix-loop-helix (bHLH) DNA-binding protein 
 vvi-u.5   100240845   transcription factor bHLH111 
 ppo-u.5   7457838   transcription factor bHLH111 
 ppo-u.5   7459079   transcription factor bHLH111 
 mtr-u.5   25484910   transcription factor bHLH111 
 sly-u.5   101252913   transcription factor bHLH112 
 osa-u.5   4343202   uncharacterized LOC4343202 
 zma-u.5   103647665   transcription factor bHLH111 
 zma-u.5   103633112   uncharacterized LOC103633112 

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Top 50 coexpressed genes to 107909931 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107909931 (ghi-r.1 coexpression data)

CoexMap"107909931"


ghiLOC107909931 | Entrez gene ID : 107909931    
Species ghi ath gma vvi ppo mtr sly osa zma hvu bna cit bra sbi bdi nta tae cre sot
Paralog 1 1 2 1 2 1 1 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (1121 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0000978 [list] [network] RNA polymerase II cis-regulatory region sequence-specific DNA binding  (605 genes)  IEA  
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific  (729 genes)  IEA  
GO:0046983 [list] [network] protein dimerization activity  (1206 genes)  IEA  
Protein XP_016693129.1 [sequence] [blastp]
XP_016693130.1 [sequence] [blastp]
XP_016693131.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_016693129.1)
nucl 10  (predict for XP_016693130.1)
nucl 10  (predict for XP_016693131.1)
Subcellular
localization
TargetP
chlo 8,  other 3  (predict for XP_016693129.1)
chlo 8,  other 3  (predict for XP_016693130.1)
chlo 8,  other 3  (predict for XP_016693131.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107909931
ath-u.5
for
AT1G31050
gma-u.5
for
100793512
gma-u.5
for
100527800
vvi-u.5
for
100240845
ppo-u.5
for
7457838
ppo-u.5
for
7459079
mtr-u.5
for
25484910
sly-u.5
for
101252913
osa-u.5
for
4343202
zma-u.5
for
103647665
zma-u.5
for
103633112


Ortholog ID: 9820
Species ghi ghi ath bra bna bna cit gma gma vvi ppo ppo mtr sly sot nta osa zma zma sbi bdi
Symbol LOC107909931 LOC107897758 AT1G31050 LOC103840273 LOC106364379 LOC106352369 LOC102610751 LOC100793512 LOC100527800 LOC100240845 LOC7459079 LOC7457838 LOC25484910 LOC101252913 LOC102589772 LOC107772681 LOC4343202 LOC103647665 LOC103633112 LOC8077274 LOC100841083
Function* transcription factor bHLH111 transcription factor bHLH111 basic helix-loop-helix (bHLH) DNA-binding superfamily protein transcription factor bHLH111 transcription factor bHLH111 transcription factor bHLH111 transcription factor bHLH111 transcription factor bHLH111 basic helix-loop-helix (bHLH) DNA-binding protein transcription factor bHLH111 transcription factor bHLH111 transcription factor bHLH111 transcription factor bHLH111 transcription factor bHLH112 transcription factor bHLH111 uncharacterized LOC107772681 uncharacterized LOC4343202 transcription factor bHLH111 uncharacterized LOC103633112 transcription factor bHLH111 transcription factor bHLH111
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta02010 ABC transporters 2
nta04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107909931 107897758 839991 103840273 106364379 106352369 102610751 100793512 100527800 100240845 7459079 7457838 25484910 101252913 102589772 107772681 4343202 103647665 103633112 8077274 100841083
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