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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100841083   transcription factor bHLH111 
 osa-u.5   4343202   uncharacterized LOC4343202 
 zma-u.5   103647665   transcription factor bHLH111 
 zma-u.5   103633112   uncharacterized LOC103633112 
 sbi-r.1   8077274   transcription factor bHLH111 
 ath-u.5   AT1G31050   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 gma-u.5   100793512   transcription factor bHLH111 
 gma-u.5   100527800   basic helix-loop-helix (bHLH) DNA-binding protein 
 sly-u.5   101252913   transcription factor bHLH112 
 bra-r.6   103840273   transcription factor bHLH111 
 vvi-u.5   100240845   transcription factor bHLH111 
 ppo-u.5   7459079   transcription factor bHLH111 
 ppo-u.5   7457838   transcription factor bHLH111 
 mtr-u.5   25484910   transcription factor bHLH111 
 ghi-r.1   107897758   transcription factor bHLH111 
 ghi-r.1   107909931   transcription factor bHLH111 
 bna-r.1   106352369   transcription factor bHLH111 
 bna-r.1   106364379   transcription factor bHLH111 
 sot-r.1   102589772   transcription factor bHLH111 
 cit-r.1   102610751   transcription factor bHLH111 
 nta-r.1   107790577   transcription factor bHLH111-like 
 nta-r.1   107772681   uncharacterized LOC107772681 

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Top 50 coexpressed genes to 100841083 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100841083 (bdi-r.1 coexpression data)

CoexMap"100841083"


bdiLOC100841083 | Entrez gene ID : 100841083      
Species bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta hvu tae cre
Paralog 1 1 2 1 1 2 1 1 1 2 1 2 2 1 1 2 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (365 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2880 genes)  IEA  
GO MF
GO:0000978 [list] [network] RNA polymerase II cis-regulatory region sequence-specific DNA binding  (205 genes)  IEA  
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific  (256 genes)  IEA  
GO:0046983 [list] [network] protein dimerization activity  (396 genes)  IEA  
Protein XP_010238586.1 [sequence] [blastp]
XP_014754625.1 [sequence] [blastp]
XP_024310306.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_010238586.1)
nucl 10  (predict for XP_014754625.1)
nucl 10  (predict for XP_024310306.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_010238586.1)
chlo 9  (predict for XP_014754625.1)
other 8  (predict for XP_024310306.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100841083
osa-u.5
for
4343202
zma-u.5
for
103647665
zma-u.5
for
103633112
sbi-r.1
for
8077274
ath-u.5
for
AT1G31050
gma-u.5
for
100793512
gma-u.5
for
100527800
sly-u.5
for
101252913
bra-r.6
for
103840273
vvi-u.5
for
100240845
ppo-u.5
for
7459079
ppo-u.5
for
7457838
mtr-u.5
for
25484910
ghi-r.1
for
107897758
ghi-r.1
for
107909931
bna-r.1
for
106352369
bna-r.1
for
106364379
sot-r.1
for
102589772
cit-r.1
for
102610751
nta-r.1
for
107790577
nta-r.1
for
107772681


Ortholog ID: 9820
Species bdi osa zma zma sbi ath gma gma sly bra vvi ppo ppo mtr ghi ghi bna bna sot cit nta nta
Symbol LOC100841083 LOC4343202 LOC103647665 LOC103633112 LOC8077274 AT1G31050 LOC100793512 LOC100527800 LOC101252913 LOC103840273 LOC100240845 LOC7459079 LOC7457838 LOC25484910 LOC107897758 LOC107909931 LOC106352369 LOC106364379 LOC102589772 LOC102610751 LOC107790577 LOC107772681
Function* transcription factor bHLH111 uncharacterized LOC4343202 transcription factor bHLH111 uncharacterized LOC103633112 transcription factor bHLH111 basic helix-loop-helix (bHLH) DNA-binding superfamily protein transcription factor bHLH111 basic helix-loop-helix (bHLH) DNA-binding protein transcription factor bHLH112 transcription factor bHLH111 transcription factor bHLH111 transcription factor bHLH111 transcription factor bHLH111 transcription factor bHLH111 transcription factor bHLH111 transcription factor bHLH111 transcription factor bHLH111 transcription factor bHLH111 transcription factor bHLH111 transcription factor bHLH111 transcription factor bHLH111-like uncharacterized LOC107772681
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta02010 ABC transporters 2
nta04981 Folate transport and metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100841083 4343202 103647665 103633112 8077274 839991 100793512 100527800 101252913 103840273 100240845 7459079 7457838 25484910 107897758 107909931 106352369 106364379 102589772 102610751 107790577 107772681
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